MGE detailed information
MGE type: Genomic_island MGE length: 16118 bp
Accession: NC_008563 Location: 1629378..1645495 Organism: Escherichia coli APEC O1 Replicon: chromosome
Accession: NC_008563 Location: 1629378..1645495 Organism: Escherichia coli APEC O1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS08250 () | 1626193..1627878 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| APECO1_RS31025 () | 1628078..1628203 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| APECO1_RS08255 () | 1628169..1629326 | - | 1158 | WP_001362857.1 | anaerobic sulfatase maturase | - |
| APECO1_RS08260 () | 1629378..1631060 | - | 1683 | WP_001296072.1 | sulfatase | - |
| APECO1_RS08265 () | 1631462..1632223 | - | 762 | WP_000060455.1 | acid stress response transcriptional regulator YdeO | - |
| APECO1_RS08270 () | 1632298..1632495 | - | 198 | WP_000543391.1 | two-component system connector SafA | - |
| APECO1_RS08275 () | 1632743..1635022 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| APECO1_RS08280 () | 1635361..1636275 | - | 915 | WP_000520594.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| APECO1_RS08285 () | 1636335..1636838 | - | 504 | WP_000825469.1 | Protein FimG | VF |
| APECO1_RS08290 () | 1636851..1637381 | - | 531 | WP_000876778.1 | Protein FimF | VF |
| APECO1_RS08295 () | 1637395..1640046 | - | 2652 | WP_001350647.1 | Outer membrane usher protein FimD | VF |
| APECO1_RS08300 () | 1640088..1640798 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| APECO1_RS08305 () | 1641160..1641723 | - | 564 | WP_001296074.1 | Type-1 fimbrial protein, A chain | VF |
| APECO1_RS08315 () | 1642499..1643281 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| APECO1_RS08320 () | 1643391..1643648 | + | 258 | WP_001210030.1 | hypothetical protein | - |
| APECO1_RS08325 () | 1643907..1645229 | - | 1323 | WP_001125475.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| APECO1_RS08330 () | 1645229..1645495 | - | 267 | WP_001332145.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| APECO1_RS08335 () | 1645803..1646561 | + | 759 | WP_001286589.1 | trans-aconitate 2-methyltransferase | - |
| APECO1_RS08340 () | 1646565..1647479 | - | 915 | WP_001306069.1 | bestrophin family protein | - |
| APECO1_RS08350 () | 1647676..1649127 | - | 1452 | WP_000854637.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0.007 |