MGE detailed information
MGE type: Prophage MGE length: 44840 bp
Accession: NC_008563 Location: 1467071..1511910 Organism: Escherichia coli APEC O1 Replicon: chromosome
Accession: NC_008563 Location: 1467071..1511910 Organism: Escherichia coli APEC O1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS07425 () | 1463121..1464104 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| APECO1_RS31540 () | 1464379..1464552 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| APECO1_RS07435 () | 1464582..1465955 | + | 1374 | WP_000123782.1 | ATP-dependent RNA helicase DbpA | - |
| APECO1_RS07440 () | 1466084..1467019 | - | 936 | WP_001157379.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| APECO1_RS28495 () | 1467071..1468306 | - | 1236 | WP_000040829.1 | Putative defective protein IntQ ; Integrase | Integrase |
| APECO1_RS07450 () | 1468308..1468523 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| APECO1_RS07455 () | 1468623..1468811 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1468627..1468805 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1468627..1468805 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1468627..1468805 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1468627..1468805 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| APECO1_RS07460 () | 1468804..1468998 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| APECO1_RS07465 () | 1469055..1469864 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| APECO1_RS07470 () | 1469857..1472457 | - | 2601 | WP_000105155.1 | exodeoxyribonuclease VIII | - |
| APECO1_RS07475 () | 1472559..1472834 | - | 276 | WP_021542963.1 | phage protein | - |
| APECO1_RS07480 () | 1472909..1473085 | - | 177 | WP_000245512.1 | hypothetical protein | - |
| APECO1_RS07485 () | 1473079..1473300 | - | 222 | WP_000560230.1 | killing protein KilR | - |
| APECO1_RS07490 () | 1473731..1474219 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| APECO1_RS27875 () | 1474216..1474371 | - | 156 | Protein_1431 | DUF1391 family protein | - |
| APECO1_RS07495 () | 1474820..1475239 | - | 420 | WP_000410102.1 | helix-turn-helix domain-containing protein | - |
| APECO1_RS07500 () | 1475336..1475578 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| APECO1_RS07505 () | 1475575..1475997 | + | 423 | WP_000702029.1 | hypothetical protein | - |
| APECO1_RS07510 () | 1476076..1476870 | + | 795 | WP_021568026.1 | hypothetical protein | - |
| APECO1_RS07515 () | 1476877..1477623 | + | 747 | WP_000789010.1 | ATP-binding protein | - |
| APECO1_RS07520 () | 1477646..1478407 | + | 762 | WP_000450696.1 | DUF1627 domain-containing protein | - |
| APECO1_RS07525 () | 1478423..1478839 | + | 417 | WP_001151240.1 | DUF977 family protein | - |
| APECO1_RS07530 () | 1479024..1479689 | + | 666 | WP_021554705.1 | epoxyqueuosine reductase QueH | - |
| APECO1_RS07535 () | 1479928..1480083 | + | 156 | Protein_1440 | type I toxin-antitoxin system toxin HokD | - |
| APECO1_RS07540 () | 1480292..1480471 | + | 180 | WP_000119355.1 | hypothetical protein | - |
| APECO1_RS07545 () | 1480490..1480975 | + | 486 | WP_000818163.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| APECO1_RS07555 () | 1481483..1482082 | + | 600 | WP_000940343.1 | DUF1367 family protein | - |
| APECO1_RS07560 () | 1482082..1482372 | + | 291 | WP_000228029.1 | DUF1364 domain-containing protein | - |
| APECO1_RS07565 () | 1482369..1482905 | + | 537 | WP_000640127.1 | DUF1133 family protein | - |
| APECO1_RS07580 () | 1484198..1484413 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| APECO1_RS07585 () | 1484413..1484910 | + | 498 | WP_001135280.1 | lysozyme RrrD | - |
| APECO1_RS30270 () | 1485127..1485312 | + | 186 | WP_001228693.1 | Rz1 family lipoprotein | - |
| APECO1_RS07595 () | 1485509..1486966 | + | 1458 | WP_001097899.1 | Trk system potassium transporter TrkG | - |
| APECO1_RS07600 () | 1487104..1487895 | + | 792 | WP_001291096.1 | ParB/Srx family N-terminal domain-containing protein | - |
| APECO1_RS07605 () | 1487888..1488820 | + | 933 | WP_001204031.1 | hypothetical protein | - |
| APECO1_RS07610 () | 1488756..1489007 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| APECO1_RS07615 () | 1489011..1490105 | + | 1095 | Protein_1453 | terminase small subunit | - |
| APECO1_RS07620 () | 1490086..1491387 | + | 1302 | WP_000625349.1 | terminase family protein | - |
| APECO1_RS07625 () | 1491390..1492796 | + | 1407 | WP_000763705.1 | DUF4055 domain-containing protein | - |
| APECO1_RS07630 () | 1492780..1493892 | + | 1113 | WP_024165603.1 | hypothetical protein | - |
| APECO1_RS07635 () | 1493997..1494761 | + | 765 | WP_000770040.1 | hypothetical protein | - |
| APECO1_RS07640 () | 1494860..1495999 | + | 1140 | WP_000918489.1 | hypothetical protein | - |
| APECO1_RS07645 () | 1496042..1496266 | + | 225 | WP_000908083.1 | hypothetical protein | - |
| APECO1_RS07650 () | 1496270..1496665 | + | 396 | WP_000634207.1 | hypothetical protein | - |
| APECO1_RS07655 () | 1496665..1497048 | + | 384 | WP_000524258.1 | hypothetical protein | - |
| APECO1_RS07660 () | 1497049..1497429 | + | 381 | WP_001029814.1 | hypothetical protein | - |
| APECO1_RS07665 () | 1497426..1497818 | + | 393 | WP_000144682.1 | hypothetical protein | - |
| APECO1_RS07670 () | 1497845..1498807 | + | 963 | WP_000094291.1 | hypothetical protein | - |
| APECO1_RS07675 () | 1498958..1499317 | + | 360 | WP_122984268.1 | hypothetical protein | - |
| APECO1_RS07680 () | 1499425..1499625 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| APECO1_RS07685 () | 1499789..1503022 | + | 3234 | WP_000840612.1 | phage tail tape measure protein | - |
| APECO1_RS07690 () | 1503015..1503353 | + | 339 | WP_000024053.1 | phage tail protein | - |
| APECO1_RS07695 () | 1503353..1504051 | + | 699 | WP_001152480.1 | phage minor tail protein L | - |
| APECO1_RS07700 () | 1504056..1504799 | + | 744 | WP_000194742.1 | C40 family peptidase | - |
| APECO1_RS07705 () | 1504697..1505344 | + | 648 | WP_011703559.1 | tail assembly protein | - |
| APECO1_RS07710 () | 1505405..1508803 | + | 3399 | WP_000515283.1 | host specificity protein J | - |
| APECO1_RS07715 () | 1508871..1509470 | + | 600 | WP_001228229.1 | Outer membrane protein X | VF |
| APECO1_RS07720 () | 1509535..1511910 | + | 2376 | WP_024179262.1 | prophage tail fiber N-terminal domain-containing protein | - |
| APECO1_RS07725 () | 1511910..1512191 | + | 282 | WP_000654144.1 | hypothetical protein | - |
| APECO1_RS07730 () | 1512201..1512905 | + | 705 | WP_000235972.1 | tail fiber domain-containing protein | - |
| APECO1_RS07735 () | 1512916..1513206 | + | 291 | WP_000355611.1 | hypothetical protein | - |
| APECO1_RS07740 () | 1513719..1514432 | + | 714 | WP_000358617.1 | cytolethal distending toxin type IV subunit CdtA | - |
| APECO1_RS07745 () | 1514429..1515250 | + | 822 | WP_000734594.1 | cytolethal distending toxin type IV nuclease subunit CdtB | - |
| APECO1_RS07750 () | 1515247..1515819 | + | 573 | WP_001220161.1 | cytolethal distending toxin type IV subunit CdtC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|