MGE detailed information
MGE type: IScluster/Tn MGE length: 20719 bp
Accession: NC_008345 Location: 4119681..4140399 Organism: Shewanella frigidimarina NCIMB 400 Replicon: chromosome
Accession: NC_008345 Location: 4119681..4140399 Organism: Shewanella frigidimarina NCIMB 400 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SFRI_RS17820 () | 4114890..4115378 | - | 489 | WP_208855609.1 | maturase | - |
| SFRI_RS17825 () | 4115544..4115984 | - | 441 | WP_011638890.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| SFRI_RS17830 () | 4116070..4118475 | + | 2406 | WP_011638891.1 | heavy metal translocating P-type ATPase | - |
| SFRI_RS17835 () | 4118472..4119551 | + | 1080 | WP_011638892.1 | lipoprotein signal peptidase | - |
| SFRI_RS17840 () | 4119681..4120238 | + | 558 | WP_004213590.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| SFRI_RS17845 () | 4120241..4121785 | + | 1545 | Protein_3447 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| SFRI_RS17850 () | 4121926..4124904 | + | 2979 | WP_006991878.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| SFRI_RS17855 () | 4125082..4125984 | + | 903 | WP_002962881.1 | cation diffusion facilitator family transporter | - |
| SFRI_RS17860 () | 4125971..4126381 | + | 411 | Protein_3450 | PAP2 family protein | - |
| SFRI_RS17865 () | 4126523..4129015 | + | 2493 | Protein_3451 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| SFRI_RS17870 () | 4129062..4132148 | - | 3087 | WP_011638896.1 | Tn3 family transposase ISPsy42 | Transposase |
| SFRI_RS17875 () | 4132172..4132483 | - | 312 | WP_011638897.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SFRI_RS17880 () | 4132483..4132743 | - | 261 | WP_011638898.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SFRI_RS17885 () | 4132936..4133895 | - | 960 | WP_011638899.1 | cation diffusion facilitator family transporter | - |
| SFRI_RS17890 () | 4133915..4134481 | - | 567 | WP_011638900.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| SFRI_RS21365 () | 4134489..4134770 | - | 282 | WP_024946414.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| SFRI_RS17900 () | 4134981..4137958 | + | 2978 | Protein_3458 | Tn3-like element TnShfr1 family transposase | - |
| SFRI_RS17905 () | 4138049..4138639 | + | 591 | WP_011638902.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| SFRI_RS17910 () | 4138774..4140399 | + | 1626 | WP_011638903.1 | phosphoethanolamine--lipid A transferase MCR-4.3 | VF |
| SFRI_RS17915 () | 4140617..4141108 | + | 492 | Protein_3461 | Tn3 family transposase | - |
| SFRI_RS17920 () | 4141564..4141971 | - | 408 | WP_011638872.1 | hypothetical protein | - |
| SFRI_RS17925 () | 4141964..4143766 | - | 1803 | WP_011638873.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|