MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73568 bp
Accession: NC_008344 Location: 10240..83807 Organism: Nitrosomonas eutropha C91 Replicon: chromosome
Accession: NC_008344 Location: 10240..83807 Organism: Nitrosomonas eutropha C91 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NEUT_RS00030 () | 5248..5691 | + | 444 | WP_011633142.1 | YbaN family protein | - |
| NEUT_RS00035 () | 5747..6478 | + | 732 | WP_011633143.1 | rRNA pseudouridine synthase | - |
| NEUT_RS00045 () | 6914..8767 | + | 1854 | WP_011633144.1 | tyrosine-type recombinase/integrase | - |
| NEUT_RS00050 () | 8848..9228 | + | 381 | WP_082211229.1 | hypothetical protein | - |
| NEUT_RS00055 () | 9722..10381 | - | 660 | WP_011633146.1 | LysR family substrate-binding domain-containing protein | - |
| NEUT_RS00060 () | 10750..11052 | + | 303 | WP_011633147.1 | helix-turn-helix transcriptional regulator | - |
| NEUT_RS00065 () | 11619..12452 | - | 834 | WP_011633148.1 | TlpA family protein disulfide reductase | - |
| NEUT_RS00070 () | 12740..13648 | - | 909 | WP_011633149.1 | HTH-type transcriptional regulator BenM | VF |
| NEUT_RS00080 () | 13786..15014 | + | 1229 | WP_110332601.1 | IS3 family transposase ISStma17 | Transposase |
| NEUT_RS00085 () | 15676..17298 | - | 1623 | WP_011633152.1 | multicopper oxidase domain-containing protein | - |
| NEUT_RS13745 () | 17603..18395 | + | 793 | WP_166484975.1 | IS5 family transposase ISNieu4 | Transposase |
| NEUT_RS00095 () | 18615..20036 | - | 1422 | WP_049753067.1 | Sensor histidine kinase CusS | VF |
| NEUT_RS00100 () | 20033..20716 | - | 684 | WP_011633155.1 | Transcriptional regulatory protein CusR | VF |
| NEUT_RS00105 () | 21102..21302 | - | 201 | WP_011633156.1 | heavy-metal-associated domain-containing protein | - |
| NEUT_RS00110 () | 21615..21890 | + | 276 | WP_146208353.1 | DUF2933 domain-containing protein | - |
| NEUT_RS00115 () | 21966..22937 | + | 972 | WP_011633157.1 | hypothetical protein | - |
| NEUT_RS00120 () | 23366..25171 | + | 1806 | WP_207204490.1 | copper resistance system multicopper oxidase | - |
| NEUT_RS14930 () | 25579..26334 | + | 756 | Protein_20 | copper resistance protein B | - |
| NEUT_RS00130 () | 26398..26910 | + | 513 | WP_041353613.1 | cupredoxin family protein | - |
| NEUT_RS00135 () | 27112..27693 | + | 582 | WP_011633160.1 | M23 family metallopeptidase | - |
| NEUT_RS00140 () | 27805..28260 | + | 456 | WP_207204491.1 | c-type cytochrome | - |
| NEUT_RS00145 () | 28282..30666 | - | 2385 | WP_011633162.1 | heavy metal translocating P-type ATPase | - |
| NEUT_RS00150 () | 30935..31267 | - | 333 | WP_041353387.1 | DUF4148 domain-containing protein | - |
| NEUT_RS14935 () | 31651..32082 | + | 432 | WP_049753069.1 | DUF4396 domain-containing protein | - |
| NEUT_RS14940 () | 32101..32493 | + | 393 | WP_049753070.1 | hypothetical protein | - |
| NEUT_RS00160 () | 32488..32724 | - | 237 | WP_011633163.1 | broad-spectrum mercury transporter MerE | - |
| NEUT_RS00165 () | 32721..32966 | - | 246 | WP_011633164.1 | MerR family transcriptional regulator | - |
| NEUT_RS00170 () | 32984..34636 | - | 1653 | WP_041353388.1 | mercury(II) reductase | - |
| NEUT_RS00175 () | 34684..34875 | - | 192 | WP_011633166.1 | mercury resistance system transport protein MerF | - |
| NEUT_RS00180 () | 34878..35153 | - | 276 | WP_011633167.1 | mercury resistance system periplasmic binding protein MerP | - |
| NEUT_RS00185 () | 35169..35519 | - | 351 | WP_011633168.1 | mercuric ion transporter MerT | - |
| NEUT_RS00190 () | 35591..36067 | + | 477 | WP_011633169.1 | Hg(II)-responsive transcriptional regulator | - |
| NEUT_RS14945 () | 36197..36535 | + | 339 | WP_049753071.1 | DUF305 domain-containing protein | - |
| NEUT_RS14950 () | 36532..36627 | + | 96 | WP_207204475.1 | hypothetical protein | - |
| NEUT_RS14395 () | 36665..36817 | - | 153 | WP_166484976.1 | hypothetical protein | - |
| NEUT_RS00200 () | 36832..37344 | - | 513 | WP_011633171.1 | cupredoxin family protein | - |
| NEUT_RS00205 () | 37785..38936 | - | 1152 | WP_041353389.1 | glycosyltransferase | - |
| NEUT_RS00210 () | 40022..40306 | + | 285 | WP_011633173.1 | DUF4148 domain-containing protein | - |
| NEUT_RS00215 () | 40449..41783 | - | 1335 | WP_011633174.1 | heavy metal sensor histidine kinase | - |
| NEUT_RS00220 () | 41777..42472 | - | 696 | WP_011633175.1 | Transcriptional activator protein CzcR | VF |
| NEUT_RS00225 () | 42775..43797 | - | 1023 | WP_011633176.1 | putative glycosyltransferase | VF |
| NEUT_RS00230 () | 44303..44866 | + | 564 | WP_041353390.1 | manganese efflux pump MntP | - |
| NEUT_RS00235 () | 44910..45842 | - | 933 | WP_011633178.1 | CDF family Co(II)/Ni(II) efflux transporter DmeF | - |
| NEUT_RS00240 () | 45909..46184 | + | 276 | WP_041353617.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| NEUT_RS14400 () | 46302..46457 | - | 156 | WP_166484977.1 | hypothetical protein | - |
| NEUT_RS14405 () | 46787..46987 | - | 201 | WP_011633180.1 | Tn3 family transposase | - |
| NEUT_RS00250 () | 47236..47529 | - | 294 | WP_041353618.1 | DUF4148 domain-containing protein | - |
| NEUT_RS00255 () | 47909..48595 | - | 687 | WP_011633182.1 | multicopper oxidase domain-containing protein | - |
| NEUT_RS00260 () | 49039..51375 | - | 2337 | WP_011633183.1 | heavy metal translocating P-type ATPase | - |
| NEUT_RS00265 () | 51479..51895 | - | 417 | WP_011633184.1 | CopG family transcriptional regulator | - |
| NEUT_RS00270 () | 51957..52436 | - | 480 | WP_011633185.1 | cytochrome c | - |
| NEUT_RS00275 () | 52487..54751 | - | 2265 | WP_011633186.1 | DUF3141 domain-containing protein | - |
| NEUT_RS00280 () | 54800..55288 | - | 489 | WP_011633187.1 | hypothetical protein | - |
| NEUT_RS00285 () | 55436..56182 | - | 747 | WP_011633188.1 | cytochrome C biogenesis protein CcdA | - |
| NEUT_RS14410 () | 56226..56564 | - | 339 | WP_146208354.1 | TlpA family protein disulfide reductase | - |
| NEUT_RS14415 () | 56522..56842 | - | 321 | WP_110332528.1 | redoxin family protein | - |
| NEUT_RS00295 () | 56862..57719 | - | 858 | WP_011633189.1 | c-type cytochrome biogenesis protein CcmI | - |
| NEUT_RS00300 () | 57722..58171 | - | 450 | WP_011633190.1 | cytochrome c-type biogenesis protein CcmH | - |
| NEUT_RS00305 () | 58168..58692 | - | 525 | WP_011633191.1 | DsbE family thiol:disulfide interchange protein | - |
| NEUT_RS00310 () | 58689..60650 | - | 1962 | WP_011633192.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| NEUT_RS00315 () | 60656..61102 | - | 447 | WP_011633193.1 | Cytochrome c-type biogenesis protein CcmE | VF |
| NEUT_RS00320 () | 61099..61281 | - | 183 | WP_041353392.1 | heme exporter protein CcmD | - |
| NEUT_RS00325 () | 61278..62015 | - | 738 | WP_011633194.1 | Heme exporter protein C | VF |
| NEUT_RS00330 () | 62027..62710 | - | 684 | WP_011633195.1 | Heme exporter protein B | VF |
| NEUT_RS00335 () | 62707..63321 | - | 615 | WP_011633196.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| NEUT_RS00340 () | 63528..63884 | - | 357 | WP_011633197.1 | hypothetical protein | - |
| NEUT_RS00345 () | 63958..64770 | - | 813 | WP_041353621.1 | class I SAM-dependent methyltransferase | - |
| NEUT_RS00350 () | 64889..65806 | - | 918 | WP_207204476.1 | beta-propeller fold lactonase family protein | - |
| NEUT_RS14955 () | 66062..66217 | - | 156 | WP_207204477.1 | hypothetical protein | - |
| NEUT_RS00355 () | 66404..68854 | + | 2451 | WP_110332534.1 | Copper-transporting P-type ATPase | VF |
| NEUT_RS00360 () | 68874..69281 | + | 408 | WP_049753072.1 | Cu(I)-responsive transcriptional regulator | - |
| NEUT_RS00365 () | 69328..71193 | - | 1866 | WP_011633202.1 | TraI domain-containing protein | - |
| NEUT_RS00370 () | 71463..71696 | + | 234 | WP_011633203.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NEUT_RS00375 () | 71683..72099 | + | 417 | WP_011633204.1 | PIN domain-containing protein | Toxin Detail |
| NEUT_RS00380 () | 72119..72487 | + | 369 | WP_041353624.1 | DUF3742 family protein | - |
| NEUT_RS00385 () | 72484..73989 | - | 1506 | WP_011633206.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NEUT_RS00390 () | 74005..74349 | - | 345 | WP_011633207.1 | hypothetical protein | - |
| NEUT_RS00395 () | 74346..75743 | - | 1398 | WP_011633208.1 | integrating conjugative element protein | - |
| NEUT_RS00400 () | 75762..76694 | - | 933 | WP_011633209.1 | TIGR03756 family integrating conjugative element protein | - |
| NEUT_RS00405 () | 76691..77122 | - | 432 | WP_011633210.1 | TIGR03757 family integrating conjugative element protein | - |
| NEUT_RS00410 () | 77282..77851 | - | 570 | WP_011633211.1 | hypothetical protein | - |
| NEUT_RS00415 () | 77979..78482 | - | 504 | WP_011633212.1 | DNA repair protein RadC | - |
| NEUT_RS00420 () | 78680..79354 | - | 675 | WP_207204478.1 | thioredoxin domain-containing protein | - |
| NEUT_RS00425 () | 79907..80566 | - | 660 | WP_011633214.1 | thioredoxin domain-containing protein | - |
| NEUT_RS00430 () | 80563..81012 | - | 450 | WP_011633215.1 | disulfide bond formation protein B | - |
| NEUT_RS00435 () | 81058..81552 | - | 495 | WP_011633216.1 | copper chaperone PCu(A)C | - |
| NEUT_RS00440 () | 81615..83741 | - | 2127 | WP_011633217.1 | cadmium-translocating P-type ATPase | - |
| NEUT_RS00445 () | 83808..84227 | + | 420 | WP_011633218.1 | helix-turn-helix domain-containing protein | - |
| NEUT_RS00450 () | 84539..87430 | - | 2892 | WP_011633219.1 | conjugative transfer ATPase | - |
| NEUT_RS00455 () | 87430..87864 | - | 435 | WP_011633220.1 | TIGR03751 family conjugal transfer lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|