MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 75044 bp
Accession: NC_007973 Location: 2524369..2599412 Organism: Cupriavidus metallidurans CH34 Replicon: chromosome
Accession: NC_007973 Location: 2524369..2599412 Organism: Cupriavidus metallidurans CH34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMET_RS11545 () | 2521023..2521658 | - | 636 | WP_003098972.1 | cation diffusion facilitator family transporter | - |
| RMET_RS33565 () | 2521875..2522707 | + | 833 | Protein_2281 | DUF3703 domain-containing protein | - |
| RMET_RS11555 () | 2522734..2523132 | - | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| RMET_RS11560 () | 2523224..2526136 | + | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| RMET_RS11565 () | 2526140..2526640 | + | 501 | WP_003098955.1 | lipoprotein signal peptidase | - |
| RMET_RS11570 () | 2526977..2527288 | + | 312 | WP_003108988.1 | hypothetical protein | - |
| RMET_RS11575 () | 2527626..2527838 | + | 213 | WP_003116833.1 | hypothetical protein | - |
| RMET_RS11580 () | 2527860..2528252 | + | 393 | WP_003116832.1 | hypothetical protein | - |
| RMET_RS11585 () | 2528435..2529121 | + | 687 | WP_003116830.1 | hypothetical protein | - |
| RMET_RS11590 () | 2529205..2529942 | + | 738 | WP_003116829.1 | hypothetical protein | - |
| RMET_RS11595 () | 2530040..2530318 | + | 279 | WP_003116828.1 | hypothetical protein | - |
| RMET_RS11600 () | 2530607..2531431 | + | 825 | WP_003098941.1 | hypothetical protein | - |
| RMET_RS11605 () | 2531693..2532100 | - | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| RMET_RS11610 () | 2532172..2532522 | + | 351 | WP_003116827.1 | mercuric ion transporter MerT | - |
| RMET_RS11615 () | 2532535..2532822 | + | 288 | WP_003116826.1 | mercury resistance system periplasmic binding protein MerP | - |
| RMET_RS11620 () | 2532833..2534519 | + | 1687 | Protein_2295 | mercury(II) reductase | - |
| RMET_RS32250 () | 2534544..2535535 | + | 992 | Protein_2296 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| RMET_RS11630 () | 2535569..2535865 | + | 297 | Protein_2297 | DUF3085 domain-containing protein | - |
| RMET_RS11635 () | 2536173..2536457 | + | 285 | WP_003098923.1 | hypothetical protein | - |
| RMET_RS11640 () | 2536768..2537673 | + | 906 | WP_003116825.1 | DUF3577 domain-containing protein | - |
| RMET_RS11645 () | 2537819..2538646 | + | 828 | WP_003116824.1 | DUF945 domain-containing protein | - |
| RMET_RS11650 () | 2538741..2539430 | + | 690 | WP_003116823.1 | DUF3275 family protein | - |
| RMET_RS11655 () | 2539525..2539866 | + | 342 | WP_003116822.1 | hypothetical protein | - |
| RMET_RS11660 () | 2539971..2540378 | + | 408 | WP_003116821.1 | hypothetical protein | - |
| RMET_RS11665 () | 2540395..2540655 | + | 261 | WP_003090124.1 | hypothetical protein | - |
| RMET_RS11670 () | 2540732..2541379 | + | 648 | WP_003116820.1 | hypothetical protein | - |
| RMET_RS11675 () | 2541444..2542553 | + | 1110 | WP_003116819.1 | O-methyltransferase | - |
| RMET_RS11680 () | 2542604..2542924 | + | 321 | WP_003116818.1 | hypothetical protein | - |
| RMET_RS11685 () | 2543014..2543319 | + | 306 | WP_003116817.1 | hypothetical protein | - |
| RMET_RS11690 () | 2543456..2545735 | + | 2280 | WP_004350563.1 | DEAD/DEAH box helicase | - |
| RMET_RS11695 () | 2545874..2546473 | + | 600 | WP_011516994.1 | hypothetical protein | VF |
| RMET_RS11700 () | 2546470..2547114 | + | 645 | WP_003098888.1 | hypothetical protein | - |
| RMET_RS11705 () | 2547127..2547864 | + | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| RMET_RS11710 () | 2547846..2548436 | + | 591 | WP_003109780.1 | hypothetical protein | VF |
| RMET_RS11715 () | 2548433..2548981 | + | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| RMET_RS11720 () | 2548986..2551175 | + | 2190 | WP_004350569.1 | type IV conjugative transfer system coupling protein TraD | - |
| RMET_RS11725 () | 2551172..2551921 | + | 750 | WP_003153644.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| RMET_RS11730 () | 2551962..2554586 | - | 2625 | WP_003153642.1 | AAA family ATPase | - |
| RMET_RS11735 () | 2554596..2555321 | - | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| RMET_RS11740 () | 2555360..2556262 | - | 903 | WP_003153640.1 | nucleotidyltransferase domain-containing protein | - |
| RMET_RS11745 () | 2556262..2556762 | - | 501 | WP_003090159.1 | hypothetical protein | - |
| RMET_RS11750 () | 2556759..2557229 | - | 471 | WP_003153638.1 | hypothetical protein | - |
| RMET_RS11755 () | 2557226..2558140 | - | 915 | WP_003050256.1 | AAA family ATPase | - |
| RMET_RS11760 () | 2558158..2558733 | - | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| RMET_RS11765 () | 2558730..2559200 | - | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RMET_RS11770 () | 2559404..2559787 | + | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| RMET_RS11775 () | 2559784..2560017 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| RMET_RS11780 () | 2560034..2560393 | + | 360 | WP_003153634.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| RMET_RS11785 () | 2560406..2560804 | + | 399 | WP_003153632.1 | TIGR03750 family conjugal transfer protein | - |
| RMET_RS11790 () | 2560801..2561493 | + | 693 | WP_004350603.1 | TIGR03746 family integrating conjugative element protein | - |
| RMET_RS11795 () | 2561490..2562401 | + | 912 | WP_004350604.1 | TIGR03749 family integrating conjugative element protein | - |
| RMET_RS11800 () | 2562391..2563809 | + | 1419 | WP_004350605.1 | TIGR03752 family integrating conjugative element protein | - |
| RMET_RS11805 () | 2563790..2564230 | + | 441 | WP_003149753.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| RMET_RS11810 () | 2564230..2567121 | + | 2892 | WP_011516996.1 | conjugative transfer ATPase | - |
| RMET_RS11815 () | 2567146..2567910 | + | 765 | WP_003149757.1 | DsbA family protein | - |
| RMET_RS11820 () | 2568086..2568580 | + | 495 | WP_003149760.1 | DNA repair protein RadC | - |
| RMET_RS11825 () | 2568745..2569191 | + | 447 | WP_004350615.1 | TIGR03757 family integrating conjugative element protein | - |
| RMET_RS11830 () | 2569188..2570138 | + | 951 | WP_004350617.1 | TIGR03756 family integrating conjugative element protein | - |
| RMET_RS11835 () | 2570148..2571542 | + | 1395 | WP_003149765.1 | integrating conjugative element protein | - |
| RMET_RS11840 () | 2571539..2571895 | + | 357 | WP_003149767.1 | hypothetical protein | - |
| RMET_RS11845 () | 2571911..2573458 | + | 1548 | WP_004350620.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| RMET_RS11850 () | 2573474..2573833 | - | 360 | WP_003149770.1 | DUF3742 family protein | - |
| RMET_RS11855 () | 2573907..2574539 | - | 633 | WP_003149772.1 | RES family NAD+ phosphorylase | - |
| RMET_RS11860 () | 2574552..2575178 | - | 627 | WP_003149774.1 | hypothetical protein | - |
| RMET_RS11865 () | 2575494..2577386 | + | 1893 | WP_004350623.1 | TraI domain-containing protein | - |
| RMET_RS11870 () | 2577434..2578429 | - | 996 | WP_004350625.1 | AraC family transcriptional regulator | - |
| RMET_RS11875 () | 2578841..2579635 | + | 795 | WP_004350627.1 | crotonase/enoyl-CoA hydratase family protein | - |
| RMET_RS11880 () | 2579695..2580066 | - | 372 | WP_003149783.1 | DsrE family protein | - |
| RMET_RS11885 () | 2580177..2580554 | - | 378 | WP_004350630.1 | carboxymuconolactone decarboxylase family protein | - |
| RMET_RS11890 () | 2580631..2581857 | - | 1227 | WP_004350634.1 | MFS transporter | - |
| RMET_RS11895 () | 2582007..2582318 | + | 312 | WP_003149789.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| RMET_RS11900 () | 2582341..2582868 | + | 528 | WP_004350638.1 | rhodanese family protein | - |
| RMET_RS11905 () | 2583056..2583934 | + | 879 | WP_003149790.1 | MBL fold metallo-hydrolase | - |
| RMET_RS11910 () | 2583983..2585653 | + | 1671 | WP_004350643.1 | TIGR01244 family phosphatase | - |
| RMET_RS11915 () | 2586172..2587728 | + | 1557 | WP_003149798.1 | cbb3-type cytochrome c oxidase subunit I | - |
| RMET_RS11920 () | 2587725..2588366 | + | 642 | WP_003149800.1 | cbb3-type cytochrome c oxidase subunit II | - |
| RMET_RS11925 () | 2588363..2589181 | + | 819 | WP_003149802.1 | hypothetical protein | VF |
| RMET_RS11930 () | 2589165..2590262 | + | 1098 | WP_004350647.1 | c-type cytochrome | - |
| RMET_RS11935 () | 2590243..2592501 | + | 2259 | WP_011517003.1 | cation-translocating P-type ATPase | - |
| RMET_RS11940 () | 2592526..2594124 | + | 1599 | WP_003149811.1 | apolipoprotein N-acyltransferase | - |
| RMET_RS32255 () | 2594278..2594619 | - | 342 | Protein_2360 | sensor histidine kinase | - |
| RMET_RS11945 () | 2594664..2595692 | + | 1029 | WP_011516271.1 | IS30 family transposase IS1088 | Transposase |
| RMET_RS11950 () | 2595723..2596769 | - | 1047 | Protein_2362 | sensor histidine kinase N-terminal domain-containing protein | - |
| RMET_RS11955 () | 2596766..2597434 | - | 669 | WP_003149815.1 | Transcriptional regulatory protein QseB | VF |
| RMET_RS11960 () | 2597603..2598226 | + | 624 | WP_003149817.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| RMET_RS11965 () | 2598223..2598909 | + | 687 | WP_003149819.1 | Heme exporter protein B | VF |
| RMET_RS11970 () | 2598922..2599659 | + | 738 | WP_003149822.1 | heme ABC transporter permease CcmC | - |
| RMET_RS11975 () | 2599656..2599847 | + | 192 | WP_003149824.1 | heme exporter protein CcmD | - |
| RMET_RS11980 () | 2599831..2600277 | + | 447 | WP_003149827.1 | cytochrome c maturation protein CcmE | - |
| RMET_RS11985 () | 2600281..2602242 | + | 1962 | WP_003149828.1 | heme lyase CcmF/NrfE family subunit | - |
| RMET_RS11990 () | 2602239..2602763 | + | 525 | WP_003149830.1 | DsbE family thiol:disulfide interchange protein | - |
| RMET_RS11995 () | 2602760..2603215 | + | 456 | WP_003149833.1 | cytochrome c-type biogenesis protein CcmH | - |
| RMET_RS12000 () | 2603212..2604093 | + | 882 | WP_003149835.1 | c-type cytochrome biogenesis protein CcmI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|