MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NC_007946 Location: 264479..285160 Organism: Escherichia coli UTI89 Replicon: chromosome
Accession: NC_007946 Location: 264479..285160 Organism: Escherichia coli UTI89 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UTI89_RS01210 () | 260594..261019 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| UTI89_RS01215 () | 261024..262508 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| UTI89_RS01220 () | 262531..263034 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| UTI89_RS01225 () | 263740..264258 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| UTI89_RS01235 () | 264479..266461 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| UTI89_RS01240 () | 266568..267614 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| UTI89_RS01245 () | 267607..269046 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| UTI89_RS01250 () | 269021..269311 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| UTI89_RS27900 () | 269569..270333 | + | 765 | Protein_239 | ISAs1 family transposase ISEc1 | Transposase |
| UTI89_RS01265 () | 270562..271065 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| UTI89_RS01270 () | 271159..271647 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| UTI89_RS28530 () | 271673..271867 | + | 195 | Protein_242 | transposase | - |
| UTI89_RS01275 () | 271918..272688 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| UTI89_RS01280 () | 272869..273315 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| UTI89_RS01285 () | 273358..275802 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| UTI89_RS01290 () | 276042..276620 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| UTI89_RS01295 () | 276825..277592 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| UTI89_RS01300 () | 277563..278303 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| UTI89_RS01305 () | 278615..279364 | + | 750 | WP_000093936.1 | Murein DD-endopeptidase MepH | VF |
| UTI89_RS01310 () | 279540..280037 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| UTI89_RS29155 () | 280120..280278 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| UTI89_RS01315 () | 280357..282069 | - | 1713 | Protein_252 | Flagellar biosynthesis protein FlhA | VF |
| UTI89_RS01320 () | 282041..282826 | + | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| UTI89_RS01325 () | 282897..283952 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| UTI89_RS01330 () | 284004..284297 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| UTI89_RS01335 () | 284300..284698 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| UTI89_RS01340 () | 284708..285160 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| UTI89_RS01345 () | 285350..286489 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| UTI89_RS01350 () | 286486..287100 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| UTI89_RS01355 () | 287157..288614 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| UTI89_RS01360 () | 288875..289333 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 289929..290009 | + | 81 | NuclAT_4 | - | - |
| - () | 289929..290009 | + | 81 | NuclAT_4 | - | - |
| - () | 289929..290009 | + | 81 | NuclAT_4 | - | - |
| - () | 289929..290009 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|