MGE detailed information
MGE type: IScluster/Tn MGE length: 14705 bp
Accession: NC_007608 Location: 34118..48822 Organism: Shigella boydii Sb227 Replicon: plasmid pSB4_227
Accession: NC_007608 Location: 34118..48822 Organism: Shigella boydii Sb227 Replicon: plasmid pSB4_227
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBO_RS28835 () | 29177..29515 | + | 339 | Protein_38 | IS1 family transposase | - |
| SBO_RS25030 () | 29837..31036 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| SBO_RS25035 () | 31036..32016 | + | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| SBO_RS25040 () | 32272..32754 | + | 483 | Protein_41 | IS110 family transposase | - |
| SBO_RS30305 () | 32808..32962 | - | 155 | Protein_42 | transposase domain-containing protein | - |
| SBO_RS30505 () | 33045..33803 | - | 759 | Protein_43 | group II intron reverse transcriptase/maturase | - |
| SBO_RS30605 () | 33798..34420 | - | 623 | Protein_44 | transposase | - |
| SBO_RS25060 () | 35093..35377 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SBO_RS25065 () | 35365..35850 | + | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SBO_RS30610 () | 35935..36309 | + | 375 | Protein_47 | IS3 family transposase ISLad1 | Transposase |
| SBO_RS30615 () | 36304..36855 | + | 552 | Protein_48 | IS3 family transposase ISLad1 | Transposase |
| SBO_RS25075 () | 36913..38040 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| SBO_RS25080 () | 38539..39327 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| SBO_RS25085 () | 39320..39691 | - | 372 | Protein_51 | IS21 family transposase IS100 | Transposase |
| SBO_RS25090 () | 39690..40057 | + | 368 | Protein_52 | transposase | - |
| SBO_RS25110 () | 41495..42663 | + | 1169 | WP_094096507.1 | IS3 family transposase IS911 | Transposase |
| SBO_RS29805 () | 42859..43014 | + | 156 | Protein_55 | IS256 family transposase ISEc39 | Transposase |
| SBO_RS25120 () | 43044..44771 | - | 1728 | WP_011379066.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SBO_RS28870 () | 45163..45431 | - | 269 | Protein_57 | hypothetical protein | VF |
| SBO_RS30620 () | 45578..45721 | - | 144 | Protein_58 | IS1 family transposase | - |
| SBO_RS25125 () | 46115..46812 | - | 698 | Protein_59 | IS1 family transposase IS1X2 | Transposase |
| SBO_RS30320 () | 46841..47008 | - | 168 | WP_162467016.1 | hypothetical protein | - |
| SBO_RS28885 () | 47047..47570 | + | 524 | Protein_61 | IS3 family transposase ISSfl11 | Transposase |
| SBO_RS28890 () | 47613..48822 | - | 1210 | Protein_62 | IS3 family transposase | - |
| SBO_RS25155 () | 48874..50598 | - | 1725 | WP_011379068.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| SBO_RS25160 () | 51026..52723 | - | 1698 | WP_011379069.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| SBO_RS28895 () | 53053..53232 | + | 180 | Protein_65 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|