MGE detailed information
MGE type: IScluster/Tn MGE length: 44815 bp
Accession: NC_007607 Location: 37326..82140 Organism: Shigella dysenteriae Sd197 Replicon: plasmid pSD1_197
Accession: NC_007607 Location: 37326..82140 Organism: Shigella dysenteriae Sd197 Replicon: plasmid pSD1_197
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDY_RS23325 () | 32657..34381 | - | 1725 | WP_011379044.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| SDY_RS23330 () | 34809..36506 | - | 1698 | WP_011379043.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| SDY_RS23335 () | 36836..37015 | + | 180 | Protein_41 | transposase | - |
| SDY_RS23340 () | 37032..37281 | - | 250 | Protein_42 | IS1 family transposase | - |
| SDY_RS23345 () | 37326..38220 | - | 895 | Protein_43 | IS3 family transposase IS600 | Transposase |
| SDY_RS23350 () | 38236..38933 | - | 698 | Protein_44 | IS1 family transposase | - |
| SDY_RS23355 () | 39246..40090 | + | 845 | WP_094096542.1 | IS5 family transposase ISSfl7 | Transposase |
| SDY_RS23360 () | 40229..40384 | + | 156 | Protein_46 | IS256 family transposase ISEc39 | Transposase |
| SDY_RS23365 () | 40414..42141 | - | 1728 | WP_024263018.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SDY_RS23370 () | 42529..42795 | - | 267 | WP_000957712.1 | hypothetical protein | VF |
| SDY_RS24675 () | 42941..43084 | - | 144 | Protein_49 | IS1 family transposase | - |
| SDY_RS23380 () | 43442..43594 | - | 153 | WP_011114782.1 | hypothetical protein | - |
| SDY_RS23385 () | 43633..44069 | + | 437 | Protein_51 | IS3 family transposase ISSfl11 | Transposase |
| SDY_RS23395 () | 44973..46182 | - | 1210 | Protein_53 | IS3 family transposase IS629 | Transposase |
| SDY_RS23400 () | 46229..46786 | - | 558 | Protein_54 | IS110 family transposase ISEc11 | Transposase |
| SDY_RS23405 () | 47797..49209 | + | 1413 | WP_011379035.1 | hypothetical protein | VF |
| SDY_RS23410 () | 49308..49442 | - | 135 | Protein_56 | IS1 family transposase ISEic1 | Transposase |
| SDY_RS23415 () | 49518..51215 | + | 1698 | WP_005015229.1 | hypothetical protein | VF |
| SDY_RS23425 () | 52421..53127 | + | 707 | Protein_59 | IS256 family transposase IS1414 | Transposase |
| SDY_RS23430 () | 53106..53447 | + | 342 | Protein_60 | IS4 family transposase ISEc13 | Transposase |
| SDY_RS23435 () | 53488..53655 | + | 168 | Protein_61 | IS3 family transposase ISKpn38 | Transposase |
| SDY_RS23440 () | 53721..54934 | + | 1214 | Protein_62 | IS3 family transposase IS629 | Transposase |
| SDY_RS23445 () | 55275..56927 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| SDY_RS23450 () | 56996..57690 | + | 695 | WP_134801584.1 | IS1 family transposase | - |
| SDY_RS23455 () | 58105..58854 | + | 750 | WP_000828660.1 | phosphatase PAP2 family protein | - |
| SDY_RS23460 () | 59024..59868 | - | 845 | Protein_66 | IS5 family transposase ISSfl7 | Transposase |
| SDY_RS23465 () | 60293..61747 | + | 1455 | WP_000701102.1 | hypothetical protein | VF |
| SDY_RS23475 () | 62787..63167 | - | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| SDY_RS23480 () | 63347..63742 | - | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| SDY_RS23485 () | 63742..64701 | - | 960 | WP_000921950.1 | plasmid segregation protein ParM | - |
| SDY_RS23490 () | 65140..65463 | + | 324 | Protein_72 | DUF1281 domain-containing protein | - |
| SDY_RS24735 () | 65464..65539 | + | 76 | Protein_73 | aspartate oxidase | - |
| SDY_RS23495 () | 65508..66272 | - | 765 | Protein_74 | IS3 family transposase ISSd1 | Transposase |
| SDY_RS23500 () | 66288..66985 | - | 698 | Protein_75 | IS1 family transposase | - |
| SDY_RS23505 () | 67041..67441 | - | 401 | Protein_76 | IS3 family transposase ISSfl10 | Transposase |
| SDY_RS24525 () | 67506..67646 | - | 141 | Protein_77 | IS3 family transposase IS2 | Transposase |
| SDY_RS23510 () | 67701..68234 | - | 534 | Protein_78 | transposase | - |
| SDY_RS23515 () | 68349..68987 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| SDY_RS23520 () | 69146..69615 | - | 470 | Protein_80 | IS1 family transposase IS1N | Transposase |
| SDY_RS23525 () | 69951..70136 | + | 186 | Protein_81 | IS21 family transposase IS100 | Transposase |
| SDY_RS23530 () | 70236..70445 | - | 210 | Protein_82 | peptidoglycan-binding protein | - |
| SDY_RS23540 () | 71197..71481 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| SDY_RS23545 () | 71481..71756 | + | 276 | WP_000421263.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SDY_RS24530 () | 71888..72025 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| SDY_RS23555 () | 72117..72482 | - | 366 | WP_000361391.1 | plasmid partitioning/stability family protein | - |
| SDY_RS23560 () | 72485..73053 | - | 569 | Protein_87 | plasmid segregation protein ParM | - |
| SDY_RS23565 () | 73061..74151 | + | 1091 | Protein_88 | IS66 family transposase ISEc49 | Transposase |
| SDY_RS23570 () | 74527..75220 | - | 694 | Protein_89 | IS1 family transposase | - |
| SDY_RS23575 () | 75460..75678 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| SDY_RS23580 () | 75680..75985 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| SDY_RS23585 () | 76021..76116 | + | 96 | Protein_92 | transposase domain-containing protein | - |
| SDY_RS23590 () | 76244..76938 | + | 695 | WP_164925049.1 | IS1 family transposase | - |
| SDY_RS23595 () | 77152..78789 | + | 1638 | WP_000936809.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| SDY_RS23600 () | 78997..79266 | + | 270 | WP_000079957.1 | hypothetical protein | - |
| SDY_RS24680 () | 79263..79489 | + | 227 | Protein_96 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SDY_RS23605 () | 79518..80108 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| SDY_RS24295 () | 80447..80731 | + | 285 | Protein_98 | IS66 family transposase ISCro1 | Transposase |
| SDY_RS23610 () | 80794..82140 | + | 1347 | WP_011379024.1 | IS4 family transposase IS4 | Transposase |
| SDY_RS24535 () | 82154..82345 | - | 192 | Protein_100 | IS66 family insertion sequence element accessory protein TnpB | - |
| SDY_RS23615 () | 82343..82667 | + | 325 | Protein_101 | IS3 family transposase | - |
| SDY_RS23620 () | 82697..85609 | - | 2913 | WP_164925050.1 | hypothetical protein | - |
| SDY_RS23625 () | 85612..85728 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| SDY_RS23630 () | 86092..86934 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|