MGE detailed information
MGE type: Prophage MGE length: 20416 bp
Accession: NC_007606 Location: 235981..256396 Organism: Shigella dysenteriae Sd197 Replicon: chromosome
Accession: NC_007606 Location: 235981..256396 Organism: Shigella dysenteriae Sd197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDY_RS01125 () | 232082..232882 | + | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| SDY_RS01130 () | 232960..233714 | + | 755 | Protein_219 | class I SAM-dependent methyltransferase | - |
| SDY_RS01135 () | 233762..235120 | - | 1359 | WP_000644696.1 | murein transglycosylase D | - |
| SDY_RS01140 () | 235192..235947 | - | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| SDY_RS01145 () | 235981..236703 | + | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| SDY_RS01150 () | 236700..237167 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| SDY_RS01155 () | 237232..237963 | + | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| SDY_RS01165 () | 238404..239101 | - | 698 | Protein_225 | IS1 family transposase | - |
| SDY_RS01170 () | 239152..239406 | - | 255 | WP_005020710.1 | hypothetical protein | - |
| SDY_RS01175 () | 239409..239534 | - | 126 | Protein_227 | peptidoglycan-binding protein | - |
| SDY_RS01180 () | 239550..240243 | - | 694 | Protein_228 | IS1 family transposase | - |
| SDY_RS01185 () | 240299..240910 | - | 612 | Protein_229 | peptidoglycan-binding protein LysM | - |
| SDY_RS01190 () | 240926..241078 | - | 153 | WP_001414527.1 | hypothetical protein | - |
| SDY_RS01195 () | 241099..241383 | - | 285 | Protein_231 | type VI secretion system tube protein Hcp | - |
| SDY_RS01200 () | 241442..242136 | + | 695 | WP_134802583.1 | IS1 family transposase IS1N | Transposase |
| SDY_RS01205 () | 242153..243361 | + | 1209 | Protein_233 | IS256 family transposase ISEc39 | Transposase |
| SDY_RS01210 () | 243525..244295 | - | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| SDY_RS01215 () | 244476..244922 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| SDY_RS01220 () | 244965..247409 | - | 2445 | Protein_236 | Acyl-coenzyme A dehydrogenase | VF |
| SDY_RS01225 () | 247649..248227 | + | 579 | WP_011378551.1 | Phosphoheptose isomerase | VF |
| SDY_RS01230 () | 248433..249200 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| SDY_RS01235 () | 249171..249911 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| SDY_RS01240 () | 250067..250345 | - | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| SDY_RS01245 () | 250348..250608 | - | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| SDY_RS01250 () | 250818..251567 | + | 750 | WP_011378552.1 | hypothetical protein | VF |
| SDY_RS01255 () | 251743..252060 | + | 318 | Protein_243 | transposase | - |
| SDY_RS01260 () | 252117..252811 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| SDY_RS01265 () | 253042..253386 | + | 345 | Protein_245 | putative fimbrial chaperone SfmC | VF |
| SDY_RS01270 () | 253441..254138 | + | 698 | Protein_246 | IS1 family transposase | - |
| SDY_RS01280 () | 254427..254639 | - | 213 | Protein_247 | helix-turn-helix transcriptional regulator | - |
| SDY_RS01290 () | 255405..255644 | - | 240 | Protein_249 | DNA-binding transcriptional regulator EnvY | - |
| SDY_RS01295 () | 255702..256396 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| SDY_RS01300 () | 256410..256736 | - | 327 | Protein_251 | DNA-binding transcriptional regulator EnvY | - |
| SDY_RS01305 () | 256919..257809 | - | 891 | Protein_252 | DUF4434 family protein | - |
| SDY_RS01310 () | 257810..260782 | - | 2973 | Protein_253 | bacteriophage adsorption protein NfrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|