MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 182572 bp
Accession: NC_007507 Location: 1..182572 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid pXCV183
Accession: NC_007507 Location: 1..182572 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid pXCV183
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IS_RS00375 () | 456..1748 | + | 1293 | WP_011345611.1 | AAA family ATPase | - |
| IS_RS00380 () | 1745..2743 | + | 999 | WP_011345612.1 | ParB/RepB/Spo0J family partition protein | - |
| IS_RS00385 () | 3543..4121 | - | 579 | WP_129111513.1 | hypothetical protein | - |
| IS_RS00390 () | 4890..6059 | - | 1170 | WP_049756395.1 | hypothetical protein | - |
| IS_RS00395 () | 6587..7081 | + | 495 | WP_011345615.1 | DotD/TraH family lipoprotein | - |
| IS_RS00400 () | 7068..7847 | + | 780 | WP_011345616.1 | hypothetical protein | VF |
| IS_RS00405 () | 7844..9040 | + | 1197 | WP_011345617.1 | Twitching mobility protein | VF |
| IS_RS00410 () | 9076..9318 | + | 243 | WP_041854939.1 | hypothetical protein | VF |
| IS_RS00415 () | 9412..9798 | + | 387 | WP_100665922.1 | hypothetical protein | - |
| IS_RS00420 () | 9791..10798 | + | 1008 | WP_049756396.1 | ParM/StbA family protein | - |
| IS_RS25815 () | 10795..11298 | + | 504 | WP_129111514.1 | hypothetical protein | - |
| IS_RS00425 () | 11295..12134 | + | 840 | WP_011345621.1 | hypothetical protein | VF |
| IS_RS23945 () | 12131..13867 | + | 1737 | WP_011345622.1 | Outer membrane lipoprotein BfpB | VF |
| IS_RS00435 () | 13907..15253 | + | 1347 | WP_011345623.1 | type 4b pilus protein PilO2 | - |
| IS_RS23950 () | 15243..15737 | + | 495 | WP_074038286.1 | type IV pilus biogenesis protein PilP | - |
| IS_RS00440 () | 15820..17349 | + | 1530 | WP_041854941.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IS_RS00445 () | 17351..18448 | + | 1098 | WP_011345625.1 | type II secretion system F family protein | - |
| IS_RS25820 () | 18496..19029 | + | 534 | WP_160292241.1 | hypothetical protein | VF |
| IS_RS23955 () | 19046..20026 | + | 981 | WP_157860879.1 | Flp pilus assembly complex ATPase component TadA | - |
| IS_RS23960 () | 20053..21510 | + | 1458 | WP_162012995.1 | hypothetical protein | VF |
| IS_RS23560 () | 21524..21964 | + | 441 | WP_049756399.1 | type IV pilus biogenesis protein PilM | - |
| IS_RS00460 () | 22121..22471 | + | 351 | WP_011345628.1 | hypothetical protein | - |
| IS_RS00465 () | 22586..23095 | + | 510 | WP_011345629.1 | hypothetical protein | - |
| IS_RS23965 () | 23205..23723 | - | 519 | WP_011345630.1 | hypothetical protein | - |
| IS_RS00470 () | 23755..24279 | - | 525 | WP_157860882.1 | IS1595 family transposase ISCausp4 | Transposase |
| IS_RS00475 () | 24444..25424 | + | 981 | WP_011345631.1 | IS5 family transposase IS1646 | Transposase |
| IS_RS25830 () | 29061..29342 | + | 282 | WP_152667177.1 | hypothetical protein | - |
| IS_RS00505 () | 29447..30427 | - | 981 | WP_011345631.1 | IS5 family transposase IS1646 | Transposase |
| IS_RS00510 () | 30675..31352 | + | 678 | WP_041854943.1 | hypothetical protein | - |
| IS_RS00520 () | 32545..34806 | - | 2262 | WP_041854944.1 | DotA/TraY family protein | - |
| IS_RS00525 () | 35189..35692 | + | 504 | WP_011345636.1 | hypothetical protein | - |
| IS_RS00530 () | 35682..36182 | + | 501 | WP_011345637.1 | hypothetical protein | - |
| IS_RS00535 () | 36182..37318 | + | 1137 | WP_011345638.1 | hypothetical protein | - |
| IS_RS00540 () | 37318..38148 | + | 831 | WP_011345639.1 | hypothetical protein | - |
| IS_RS00545 () | 38145..38759 | + | 615 | WP_011345640.1 | hypothetical protein | - |
| IS_RS23565 () | 38840..39757 | + | 918 | WP_011345641.1 | Murein DD-endopeptidase MepM | VF |
| IS_RS00555 () | 39827..41131 | + | 1305 | WP_011345642.1 | hypothetical protein | - |
| IS_RS00560 () | 41143..41364 | + | 222 | WP_129111520.1 | hypothetical protein | - |
| IS_RS00565 () | 41367..42923 | + | 1557 | WP_011345644.1 | DNA topoisomerase | - |
| IS_RS00570 () | 43015..43218 | + | 204 | WP_129111521.1 | hypothetical protein | - |
| IS_RS00575 () | 43389..43754 | + | 366 | WP_129111522.1 | hypothetical protein | - |
| IS_RS00580 () | 43756..44811 | + | 1056 | WP_011345646.1 | hypothetical protein | - |
| IS_RS00585 () | 44808..45305 | + | 498 | WP_011345647.1 | hypothetical protein | - |
| IS_RS23980 () | 45305..45985 | + | 681 | WP_129111523.1 | hypothetical protein | VF |
| IS_RS00595 () | 46021..47133 | + | 1113 | WP_129111524.1 | IcmP-like type IV secretion system protein | - |
| IS_RS00600 () | 47114..47893 | + | 780 | WP_011345650.1 | hypothetical protein | - |
| IS_RS00605 () | 47904..50471 | + | 2568 | WP_011345651.1 | hypothetical protein | VF |
| IS_RS00610 () | 50461..51081 | + | 621 | WP_011345652.1 | DUF882 domain-containing protein | - |
| IS_RS00615 () | 51069..51857 | + | 789 | WP_011345653.1 | thiol:disulfide interchange protein DsbG | - |
| IS_RS00620 () | 51901..52344 | + | 444 | WP_011345654.1 | hypothetical protein | - |
| IS_RS00625 () | 52630..53637 | + | 1008 | WP_157860883.1 | DUF1738 domain-containing protein | - |
| IS_RS00630 () | 53668..54459 | + | 792 | WP_011345656.1 | hypothetical protein | - |
| IS_RS00635 () | 54739..56130 | + | 1392 | WP_041854950.1 | replicative DNA helicase | - |
| IS_RS00640 () | 56639..57292 | + | 654 | WP_011345658.1 | hypothetical protein | - |
| IS_RS00645 () | 57295..58281 | + | 987 | WP_011345659.1 | hypothetical protein | - |
| IS_RS00650 () | 58342..61245 | + | 2904 | WP_011345660.1 | hypothetical protein | - |
| IS_RS00655 () | 61256..62170 | + | 915 | WP_129111526.1 | hypothetical protein | - |
| IS_RS00660 () | 62167..62670 | - | 504 | WP_041854952.1 | hypothetical protein | - |
| IS_RS00665 () | 62667..64172 | - | 1506 | WP_011345662.1 | ATP-dependent helicase | - |
| IS_RS00670 () | 64280..64678 | - | 399 | WP_041854953.1 | hypothetical protein | - |
| IS_RS25835 () | 65124..65324 | - | 201 | WP_129111528.1 | hypothetical protein | - |
| IS_RS23985 () | 65624..65881 | + | 258 | WP_074038289.1 | hypothetical protein | - |
| IS_RS00675 () | 65905..66366 | - | 462 | WP_011345663.1 | hypothetical protein | - |
| IS_RS00680 () | 66395..67261 | - | 867 | WP_011345664.1 | hypothetical protein | - |
| IS_RS00685 () | 67258..67737 | - | 480 | WP_041854954.1 | hypothetical protein | - |
| IS_RS23990 () | 67737..67928 | - | 192 | WP_011345665.1 | hypothetical protein | - |
| IS_RS00690 () | 68066..69109 | - | 1044 | WP_011345666.1 | DNA-binding protein | - |
| IS_RS00695 () | 69109..69321 | - | 213 | WP_011345667.1 | hypothetical protein | - |
| IS_RS00700 () | 69321..69668 | - | 348 | WP_011345668.1 | hypothetical protein | - |
| IS_RS00705 () | 69689..72637 | - | 2949 | WP_011345669.1 | hypothetical protein | - |
| IS_RS00710 () | 72647..72868 | - | 222 | WP_041854955.1 | hypothetical protein | - |
| IS_RS00715 () | 72868..73266 | - | 399 | WP_011345671.1 | hypothetical protein | - |
| IS_RS00720 () | 73370..73666 | - | 297 | WP_129111529.1 | hypothetical protein | - |
| IS_RS23995 () | 73687..74136 | - | 450 | WP_011345672.1 | hypothetical protein | - |
| IS_RS00730 () | 74216..74692 | - | 477 | WP_011345673.1 | hypothetical protein | - |
| IS_RS00735 () | 74679..74858 | - | 180 | WP_129111530.1 | hypothetical protein | - |
| IS_RS00740 () | 74906..75220 | - | 315 | WP_011345675.1 | hypothetical protein | - |
| IS_RS00750 () | 76136..76408 | - | 273 | WP_011345677.1 | hypothetical protein | - |
| IS_RS00755 () | 76556..77497 | - | 942 | WP_011345678.1 | DNA-binding protein | - |
| IS_RS00760 () | 77603..78688 | + | 1086 | WP_011345679.1 | site-specific integrase | - |
| IS_RS00765 () | 78912..80369 | + | 1458 | WP_011345680.1 | SEC-C domain-containing protein | - |
| IS_RS00770 () | 80410..81795 | + | 1386 | WP_011345681.1 | hypothetical protein | - |
| IS_RS00775 () | 81836..82060 | - | 225 | WP_041854959.1 | hypothetical protein | - |
| IS_RS00780 () | 82142..83233 | + | 1092 | WP_011345682.1 | AAA family ATPase | - |
| IS_RS00785 () | 83637..85442 | + | 1806 | WP_100097409.1 | S8 family peptidase | - |
| IS_RS00790 () | 85510..85761 | + | 252 | WP_011345684.1 | hypothetical protein | - |
| IS_RS00795 () | 85891..86688 | + | 798 | WP_100097393.1 | LuxR family transcriptional regulator | - |
| IS_RS00800 () | 86685..87308 | + | 624 | WP_011345686.1 | hypothetical protein | - |
| IS_RS00805 () | 87305..90616 | + | 3312 | WP_011345687.1 | UvrD-helicase domain-containing protein | - |
| IS_RS00810 () | 90720..91226 | + | 507 | WP_011345688.1 | hypothetical protein | - |
| IS_RS00815 () | 91226..91696 | + | 471 | WP_011345689.1 | hypothetical protein | - |
| IS_RS00820 () | 91677..92168 | + | 492 | WP_011345690.1 | Mov34/MPN/PAD-1 family protein | - |
| IS_RS00825 () | 92165..93523 | + | 1359 | WP_011345691.1 | ThiF family adenylyltransferase | - |
| IS_RS00830 () | 93531..94070 | + | 540 | WP_011345692.1 | hypothetical protein | - |
| IS_RS00835 () | 94208..94690 | - | 483 | WP_011345693.1 | hypothetical protein | - |
| IS_RS00840 () | 94997..96058 | + | 1062 | WP_041854960.1 | hypothetical protein | - |
| IS_RS00845 () | 96358..98460 | + | 2103 | WP_011345695.1 | hypothetical protein | - |
| IS_RS00850 () | 98928..99449 | - | 522 | WP_152667176.1 | hypothetical protein | - |
| IS_RS00860 () | 99654..100786 | + | 1133 | WP_087942069.1 | IS3 family transposase IS476 | Transposase |
| IS_RS00865 () | 100962..101427 | - | 466 | Protein_101 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| IS_RS00870 () | 101887..102924 | + | 1038 | WP_011345700.1 | hypothetical protein | - |
| IS_RS00875 () | 102912..103979 | - | 1068 | WP_011345701.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| IS_RS00885 () | 104170..105102 | + | 933 | Protein_104 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| IS_RS00890 () | 105147..108110 | + | 2964 | WP_011345703.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| IS_RS00895 () | 108441..109667 | - | 1227 | WP_011345704.1 | replication protein | - |
| IS_RS00900 () | 109947..111134 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| IS_RS00905 () | 111141..111404 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| IS_RS00910 () | 111429..111830 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IS_RS00915 () | 111827..112087 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IS_RS00920 () | 112277..112843 | + | 567 | WP_011345705.1 | Tn3 family transposase ISPsy42 | Transposase |
| IS_RS24000 () | 113115..114452 | - | 1338 | WP_011037255.1 | avirulence protein | - |
| IS_RS26465 () | 114543..115613 | - | 1071 | WP_011345706.1 | tyrosine phosphatase | - |
| IS_RS00925 () | 115889..116311 | - | 423 | Protein_114 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| IS_RS00935 () | 116655..117712 | + | 1058 | WP_087944895.1 | IS3 family transposase ISXac2 | Transposase |
| IS_RS00940 () | 117717..118640 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| IS_RS00945 () | 118855..119094 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| IS_RS00950 () | 119094..119513 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| IS_RS00955 () | 119518..122493 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| IS_RS00960 () | 122512..123210 | + | 699 | WP_005918428.1 | UPF0149 family protein | - |
| IS_RS00965 () | 123231..124163 | + | 933 | Protein_121 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| IS_RS00970 () | 124208..127168 | + | 2961 | WP_011345711.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| IS_RS00975 () | 127429..128784 | + | 1356 | WP_041854962.1 | hypothetical protein | - |
| IS_RS00980 () | 128942..129280 | + | 339 | WP_041854963.1 | hypothetical protein | - |
| IS_RS25840 () | 129331..129741 | + | 411 | WP_129111533.1 | hypothetical protein | - |
| IS_RS00985 () | 129738..130436 | + | 699 | WP_129111532.1 | hypothetical protein | - |
| IS_RS00990 () | 130456..130926 | + | 471 | WP_011345715.1 | hypothetical protein | - |
| IS_RS00995 () | 130923..131813 | + | 891 | WP_011345716.1 | hypothetical protein | - |
| IS_RS01000 () | 131923..132363 | + | 441 | WP_011345717.1 | hypothetical protein | - |
| IS_RS01005 () | 132385..133605 | + | 1221 | WP_011345718.1 | tyrosine-type recombinase/integrase | - |
| IS_RS01010 () | 133673..134068 | + | 396 | WP_011345719.1 | hypothetical protein | - |
| IS_RS01015 () | 134109..135140 | + | 1032 | WP_100666167.1 | hypothetical protein | - |
| IS_RS25845 () | 135245..135634 | + | 390 | WP_129111510.1 | hypothetical protein | - |
| IS_RS01020 () | 135674..136363 | + | 690 | WP_129111511.1 | hypothetical protein | - |
| IS_RS01025 () | 136408..137496 | - | 1089 | WP_011345722.1 | acyltransferase | - |
| IS_RS01030 () | 137795..138145 | - | 351 | WP_041854964.1 | carbon storage regulator | - |
| IS_RS01035 () | 138454..138753 | - | 300 | WP_011345724.1 | HU family DNA-binding protein | - |
| IS_RS01040 () | 138942..139295 | + | 354 | WP_011345725.1 | single-stranded DNA-binding protein | - |
| IS_RS01045 () | 139391..139768 | + | 378 | WP_011345726.1 | hypothetical protein | - |
| IS_RS01050 () | 140015..140833 | + | 819 | WP_011345727.1 | DNA methyltransferase | - |
| IS_RS01055 () | 140849..141427 | + | 579 | WP_011345728.1 | hypothetical protein | - |
| IS_RS01060 () | 141441..142664 | + | 1224 | WP_011345729.1 | site-specific DNA-methyltransferase | - |
| IS_RS01065 () | 142680..143591 | + | 912 | WP_011345730.1 | recombination-associated protein RdgC | - |
| IS_RS01070 () | 143593..143835 | + | 243 | WP_011345731.1 | hypothetical protein | - |
| IS_RS25850 () | 143837..144010 | + | 174 | WP_011345732.1 | hypothetical protein | - |
| IS_RS01075 () | 144018..144770 | + | 753 | WP_011345733.1 | DsbC family protein | - |
| IS_RS01080 () | 144767..144949 | + | 183 | WP_041854966.1 | hypothetical protein | - |
| IS_RS01085 () | 144939..145166 | + | 228 | WP_041854967.1 | hypothetical protein | - |
| IS_RS24010 () | 145224..145910 | - | 687 | WP_011345734.1 | hypothetical protein | - |
| IS_RS01095 () | 146321..147313 | + | 993 | WP_011345735.1 | hypothetical protein | - |
| IS_RS01100 () | 147335..147730 | - | 396 | WP_011345736.1 | hypothetical protein | - |
| IS_RS01105 () | 147733..149688 | - | 1956 | WP_162012996.1 | DEAD/DEAH box helicase | - |
| IS_RS01110 () | 149763..150383 | - | 621 | WP_011345738.1 | hypothetical protein | - |
| IS_RS01115 () | 150380..151387 | - | 1008 | WP_011345739.1 | hypothetical protein | - |
| IS_RS01120 () | 151384..151977 | - | 594 | WP_041854968.1 | hypothetical protein | - |
| IS_RS01125 () | 152000..153505 | - | 1506 | WP_011345741.1 | DNA cytosine methyltransferase | - |
| IS_RS01130 () | 153499..153903 | - | 405 | WP_011345742.1 | hypothetical protein | - |
| IS_RS01135 () | 153900..154697 | - | 798 | WP_011345743.1 | hypothetical protein | - |
| IS_RS01140 () | 154705..155046 | - | 342 | WP_011345744.1 | hypothetical protein | - |
| IS_RS23575 () | 155461..155757 | - | 297 | WP_011345745.1 | hypothetical protein | - |
| IS_RS01150 () | 156028..156768 | - | 741 | WP_011345746.1 | EAL domain-containing protein | - |
| IS_RS01155 () | 156994..159180 | - | 2187 | WP_011345748.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| IS_RS24015 () | 159287..159685 | + | 399 | WP_011345749.1 | hypothetical protein | - |
| IS_RS01165 () | 159704..160042 | - | 339 | WP_011345750.1 | hypothetical protein | - |
| IS_RS01170 () | 160051..165297 | - | 5247 | WP_160292234.1 | strawberry notch C-terminal domain-containing protein | - |
| IS_RS01175 () | 165376..166632 | - | 1257 | WP_011345752.1 | hypothetical protein | - |
| IS_RS01185 () | 167159..167962 | - | 804 | WP_011345754.1 | hypothetical protein | - |
| IS_RS01190 () | 168022..168681 | - | 660 | WP_011345755.1 | hypothetical protein | - |
| IS_RS26190 () | 168678..169220 | - | 543 | WP_152613123.1 | hypothetical protein | - |
| IS_RS01200 () | 169241..169597 | - | 357 | WP_011345757.1 | secreted protein | - |
| IS_RS01205 () | 169614..172661 | - | 3048 | WP_011345758.1 | hypothetical protein | VF |
| IS_RS01210 () | 172670..172933 | - | 264 | WP_041854973.1 | hypothetical protein | - |
| IS_RS01215 () | 172923..174167 | - | 1245 | WP_011345759.1 | hypothetical protein | - |
| IS_RS01220 () | 174157..174909 | - | 753 | WP_011345760.1 | HNH endonuclease | - |
| IS_RS01225 () | 174921..175322 | - | 402 | WP_041854974.1 | DUF4134 domain-containing protein | - |
| IS_RS01230 () | 175361..175891 | - | 531 | WP_011345762.1 | hypothetical protein | - |
| IS_RS01235 () | 175901..176842 | - | 942 | WP_041854975.1 | hypothetical protein | - |
| IS_RS01240 () | 176852..178096 | - | 1245 | WP_041854976.1 | DotG/IcmE/VirB10 family protein | - |
| IS_RS01245 () | 178096..179037 | - | 942 | WP_011345765.1 | hypothetical protein | VF |
| IS_RS01250 () | 179034..179771 | - | 738 | WP_126952857.1 | hypothetical protein | VF |
| IS_RS01255 () | 180223..180744 | - | 522 | WP_011345767.1 | hypothetical protein | - |
| IS_RS01260 () | 181061..182290 | - | 1230 | WP_041854977.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|