MGE detailed information
MGE type: IScluster/Tn MGE length: 19382 bp
Accession: NC_007385 Location: 173682..193063 Organism: Shigella sonnei Ss046 Replicon: plasmid pSS_046
Accession: NC_007385 Location: 173682..193063 Organism: Shigella sonnei Ss046 Replicon: plasmid pSS_046
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSON_RS26330 | 169033..169260 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| SSON_RS26335 (SSO_P192) | 169342..173613 | + | 4272 | Protein_201 | conjugative transfer relaxase/helicase TraI | - |
| SSON_RS26345 (SSO_P194) | 173682..174838 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| SSON_RS26350 (SSO_P195) | 174884..175879 | + | 996 | Protein_203 | Multifunctional conjugation protein TraI | Relaxase |
| SSON_RS26355 (SSO_P196) | 175899..176646 | + | 748 | Protein_204 | conjugal transfer pilus acetylase TraX | - |
| SSON_RS26360 (SSO_P197) | 176701..177261 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| SSON_RS26365 (SSO_P198) | 177391..177603 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| SSON_RS26370 (SSO_P200) | 177847..178308 | + | 462 | WP_001233865.1 | thermonuclease family protein | - |
| SSON_RS26375 (SSO_P201) | 178354..178563 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| SSON_RS26380 | 178602..178847 | + | 246 | Protein_209 | hypothetical protein | - |
| SSON_RS26390 | 179616..179969 | + | 354 | Protein_211 | DUF2726 domain-containing protein | - |
| SSON_RS26395 (SSO_P204) | 180209..180469 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| SSON_RS26400 | 180693..180767 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| SSON_RS26405 (SSO_P205) | 180760..181617 | + | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| SSON_RS33385 (SSO_P206) | 182317..182508 | + | 192 | WP_000829591.1 | hypothetical protein | - |
| SSON_RS26415 (SSO_P207) | 182581..182832 | + | 252 | WP_001132903.1 | plasmid stabilization protein | Antitoxin Detail |
| SSON_RS26420 (SSO_P208) | 182829..183116 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SSON_RS26425 (SSO_P209) | 183349..184548 | - | 1200 | WP_000947184.1 | IS91 family transposase ISSbo1 | Transposase |
| SSON_RS33390 | 184558..184746 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| SSON_RS26435 (SSO_P210) | 184868..185026 | + | 159 | Protein_220 | transposase | - |
| SSON_RS32845 (SSO_P211) | 185165..185320 | + | 156 | Protein_221 | IS256 family transposase ISEc39 | Transposase |
| SSON_RS26445 (SSO_P212) | 185350..187077 | - | 1728 | WP_000597732.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SSON_RS30360 (SSO_P213) | 187467..187686 | - | 220 | Protein_223 | hypothetical protein | - |
| SSON_RS32345 | 187843..187940 | - | 98 | Protein_224 | IS1 family transposase | - |
| SSON_RS26450 (SSO_P214) | 188127..189314 | - | 1188 | WP_000937570.1 | IS91 family transposase ISEc37 | Transposase |
| SSON_RS26455 (SSO_P215) | 189314..189499 | - | 186 | WP_000338652.1 | hypothetical protein | - |
| SSON_RS32350 (SSO_P219) | 190770..190946 | - | 177 | WP_000124109.1 | hypothetical protein | - |
| SSON_RS32850 (SSO_P218) | 191014..191160 | + | 147 | Protein_229 | IS630 family transposase IS630 | Transposase |
| SSON_RS26480 (SSO_P220) | 191333..192541 | - | 1209 | WP_000198535.1 | IS91 family transposase ISSbo1 | Transposase |
| SSON_RS26485 (SSO_P222) | 192522..192794 | - | 273 | WP_011310366.1 | hypothetical protein | - |
| SSON_RS30375 (SSO_P221) | 192788..193063 | + | 276 | WP_000219641.1 | IS630 family transposase IS630 | Transposase |
| SSON_RS26495 (SSO_P223) | 193412..194518 | + | 1107 | WP_000030546.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| SSON_RS26500 (SSO_P224) | 194587..195867 | + | 1281 | WP_005138823.1 | Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB | - |
| SSON_RS26505 (SSO_P225) | 195960..196985 | + | 1026 | WP_000092504.1 | NAD-dependent epimerase/dehydratase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|