MGE detailed information
MGE type: Mobilizable plasmid MGE length: 51711 bp
Accession: NC_007275 Location: 1..51711 Organism: Pseudomonas syringae pv. phaseolicola 1448A Replicon: plasmid smallplasmid
Accession: NC_007275 Location: 1..51711 Organism: Pseudomonas syringae pv. phaseolicola 1448A Replicon: plasmid smallplasmid
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSPPH_RS27155 () | 304..1617 | + | 1314 | WP_011282525.1 | replication initiation protein | - |
| PSPPH_RS27160 () | 1757..2182 | + | 426 | WP_011282542.1 | S24 family peptidase | - |
| PSPPH_RS27165 () | 2175..3458 | + | 1284 | WP_011282506.1 | Y-family DNA polymerase | - |
| PSPPH_RS27175 () | 3873..4157 | - | 285 | WP_003348777.1 | putative addiction module antidote protein | Antitoxin Detail |
| PSPPH_RS27180 () | 4154..4453 | - | 300 | WP_011282511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPPH_RS27185 () | 4625..4912 | + | 288 | WP_041924941.1 | hypothetical protein | - |
| PSPPH_RS27190 () | 4964..5380 | + | 417 | WP_011282521.1 | hypothetical protein | - |
| PSPPH_RS27195 () | 5774..6427 | + | 654 | WP_003348786.1 | AAA family ATPase | - |
| PSPPH_RS27200 () | 6516..6767 | + | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| PSPPH_RS27205 () | 7035..7676 | + | 642 | WP_011282514.1 | SOS response-associated peptidase | - |
| PSPPH_RS27210 () | 8015..8518 | + | 504 | WP_041924929.1 | hypothetical protein | - |
| PSPPH_RS27215 () | 8630..8932 | + | 303 | WP_011282533.1 | hypothetical protein | - |
| PSPPH_RS27220 () | 9242..10450 | + | 1209 | WP_041924930.1 | hypothetical protein | - |
| PSPPH_RS27225 () | 10830..11135 | + | 306 | WP_041924931.1 | hypothetical protein | - |
| PSPPH_RS27230 () | 11206..12465 | + | 1260 | WP_004667385.1 | IS256 family transposase ISPsy17 | Transposase |
| PSPPH_RS27235 () | 13126..13404 | + | 279 | WP_011282524.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| PSPPH_RS27240 () | 13376..13678 | + | 303 | WP_011282510.1 | Txe/YoeB family addiction module toxin | - |
| PSPPH_RS27245 () | 13780..14739 | - | 960 | WP_011282529.1 | Tyrosine recombinase XerC | VF |
| PSPPH_RS27250 () | 14998..15699 | + | 702 | WP_011282518.1 | FadR family transcriptional regulator | - |
| PSPPH_RS27255 () | 15775..16971 | + | 1197 | WP_011282539.1 | L-2-hydroxyglutarate oxidase | - |
| PSPPH_RS27260 () | 17013..18359 | + | 1347 | WP_082227013.1 | MFS transporter | - |
| PSPPH_RS27265 () | 18416..18601 | + | 186 | WP_041924932.1 | hypothetical protein | - |
| PSPPH_RS27270 () | 18615..18971 | - | 357 | WP_011282535.1 | helix-turn-helix domain-containing protein | - |
| PSPPH_RS27275 () | 19215..19748 | + | 534 | WP_041924933.1 | transcriptional regulator | - |
| PSPPH_RS27280 () | 19837..20049 | + | 213 | WP_004667035.1 | hypothetical protein | - |
| PSPPH_RS27285 () | 20077..20790 | + | 714 | WP_004667036.1 | hypothetical protein | VF |
| PSPPH_RS27290 () | 20790..21125 | + | 336 | WP_041924942.1 | hypothetical protein | - |
| PSPPH_RS27295 () | 21138..21569 | + | 432 | Protein_27 | VirB3 family type IV secretion system protein | - |
| PSPPH_RS27300 () | 21475..24027 | + | 2553 | WP_011282507.1 | VirB4 family type IV secretion system protein | - |
| PSPPH_RS27305 () | 24024..24710 | + | 687 | WP_011282517.1 | P-type DNA transfer protein VirB5 | - |
| PSPPH_RS27310 () | 24743..25096 | + | 354 | WP_041924935.1 | hypothetical protein | - |
| PSPPH_RS27315 () | 25107..26042 | + | 936 | WP_011282520.1 | type IV secretion system protein | - |
| PSPPH_RS29810 () | 26101..26403 | + | 303 | WP_011282551.1 | hypothetical protein | - |
| PSPPH_RS27320 () | 26441..27229 | + | 789 | WP_011282540.1 | type IV secretion system protein | - |
| PSPPH_RS27325 () | 27219..28028 | + | 810 | WP_011282543.1 | P-type conjugative transfer protein VirB9 | - |
| PSPPH_RS27330 () | 28015..29415 | + | 1401 | WP_011282519.1 | hypothetical protein | VF |
| PSPPH_RS27335 () | 29425..30456 | + | 1032 | WP_011282523.1 | Type IV secretion system protein VirB11 | VF |
| PSPPH_RS27340 () | 30466..30822 | + | 357 | WP_011282545.1 | hypothetical protein | - |
| PSPPH_RS27345 () | 30947..31180 | + | 234 | WP_011282530.1 | hypothetical protein | - |
| PSPPH_RS27350 () | 31164..33554 | + | 2391 | WP_011282508.1 | ATP-binding protein | - |
| PSPPH_RS27355 () | 33633..33866 | + | 234 | WP_041924936.1 | hypothetical protein | - |
| PSPPH_RS27360 () | 33866..35518 | + | 1653 | WP_011282527.1 | Conjugal transfer protein TraG | VF |
| PSPPH_RS27365 () | 35558..35920 | + | 363 | WP_011282538.1 | Killer protein | - |
| PSPPH_RS27370 () | 35948..38113 | + | 2166 | WP_011282541.1 | type IA DNA topoisomerase | - |
| PSPPH_RS27375 () | 38140..38427 | + | 288 | WP_011282547.1 | hypothetical protein | - |
| PSPPH_RS27380 () | 38451..39017 | + | 567 | WP_011282544.1 | single-stranded DNA-binding protein | - |
| PSPPH_RS27385 () | 39211..40065 | + | 855 | WP_050772304.1 | conjugal transfer protein, TraL family | - |
| PSPPH_RS27390 () | 40074..40712 | + | 639 | WP_011282554.1 | hypothetical protein | - |
| PSPPH_RS29815 () | 40745..41131 | - | 387 | WP_011282536.1 | hypothetical protein | - |
| PSPPH_RS27400 () | 41522..41872 | + | 351 | WP_011282505.1 | hypothetical protein | Relaxase |
| PSPPH_RS27410 () | 42859..43278 | + | 420 | WP_041924938.1 | hypothetical protein | - |
| PSPPH_RS27415 () | 43590..45605 | + | 2016 | WP_041924945.1 | hypothetical protein | - |
| PSPPH_RS27420 () | 45733..46002 | + | 270 | Protein_52 | GntR family transcriptional regulator | - |
| PSPPH_RS27425 () | 46249..46620 | - | 372 | WP_041924939.1 | hypothetical protein | - |
| PSPPH_RS27430 () | 46617..46943 | - | 327 | WP_011282549.1 | hypothetical protein | - |
| PSPPH_RS27435 () | 46967..47302 | - | 336 | WP_011282512.1 | hypothetical protein | - |
| PSPPH_RS27440 () | 47338..47619 | - | 282 | WP_011282522.1 | type II toxin-antitoxin system YafQ family toxin | - |
| PSPPH_RS27445 () | 47606..47869 | - | 264 | WP_041924940.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| PSPPH_RS27450 () | 48080..48655 | + | 576 | WP_011282556.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| PSPPH_RS27455 () | 48636..50297 | + | 1662 | WP_011282515.1 | IS481 family transposase ISAzs36 | Transposase |
| PSPPH_RS27460 () | 50287..51258 | + | 972 | WP_011282534.1 | ExeA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|