MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 20417 bp
Accession: NC_006529 Location: 1..20417 Organism: Lactobacillus salivarius UCC118 Replicon: plasmid pSF118-20
Accession: NC_006529 Location: 1..20417 Organism: Lactobacillus salivarius UCC118 Replicon: plasmid pSF118-20
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSL_RS00005 (LSL_1960) | 67..2127 | - | 2061 | WP_011241724.1 | hypothetical protein | Relaxase |
| LSL_RS00010 (LSL_1961) | 2399..2611 | + | 213 | WP_011241725.1 | hypothetical protein | - |
| LSL_RS00015 (LSL_1962) | 2628..2906 | + | 279 | WP_011241726.1 | hypothetical protein | - |
| LSL_RS00020 (LSL_1963) | 3038..3787 | - | 750 | WP_011241727.1 | Fic family protein | - |
| LSL_RS00025 (LSL_1964) | 3832..3987 | - | 156 | WP_164920211.1 | hypothetical protein | - |
| LSL_RS00030 (LSL_1965) | 4179..5282 | - | 1104 | WP_011241729.1 | replication initiator protein A | - |
| LSL_RS00035 (LSL_1966) | 5871..6122 | - | 252 | WP_011241730.1 | ribbon-helix-helix domain-containing protein | - |
| LSL_RS00040 (LSL_1967) | 6126..6935 | - | 810 | WP_011241731.1 | hypothetical protein | VF |
| LSL_RS00045 (LSL_1968) | 7011..7583 | - | 573 | WP_011241732.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| LSL_RS00050 (LSL_1969) | 8112..9443 | + | 1332 | WP_011241733.1 | FAD-dependent oxidoreductase | - |
| LSL_RS00055 (LSL_1970) | 9714..10458 | + | 745 | Protein_10 | nicotinamide mononucleotide transporter | - |
| LSL_RS00060 (LSL_1971) | 10872..11432 | + | 561 | WP_011241735.1 | alkaline shock response membrane anchor protein AmaP | - |
| LSL_RS00065 (LSL_1972) | 11444..11629 | + | 186 | WP_003596522.1 | DUF2273 domain-containing protein | - |
| LSL_RS00070 (LSL_1973) | 11657..12199 | + | 543 | WP_011241736.1 | Asp23/Gls24 family envelope stress response protein | - |
| LSL_RS00075 (LSL_1974) | 12214..12465 | + | 252 | WP_003680323.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| LSL_RS10760 (LSL_1975) | 12477..12617 | + | 141 | WP_003681696.1 | hypothetical protein | - |
| LSL_RS00080 (LSL_1976) | 12815..13030 | + | 216 | WP_003680381.1 | CsbD family protein | - |
| LSL_RS00085 (LSL_1977) | 13518..14090 | - | 573 | WP_011241737.1 | hypothetical protein | - |
| LSL_RS00090 | 14241..14345 | + | 105 | WP_041823142.1 | putative holin-like toxin | - |
| LSL_RS00095 (LSL_1978) | 14418..15797 | - | 1380 | WP_011241738.1 | IS3 family transposase ISLsa2 | Transposase |
| LSL_RS00100 (LSL_1979) | 16061..16240 | + | 180 | Protein_20 | UV-resistance | - |
| LSL_RS00105 (LSL_1980) | 16362..16766 | + | 405 | WP_164920212.1 | LysM peptidoglycan-binding domain-containing protein | - |
| LSL_RS00110 (LSL_1981) | 16759..17211 | + | 453 | WP_011241741.1 | hypothetical protein | - |
| LSL_RS00120 (LSL_1983) | 17833..18090 | - | 258 | WP_011241743.1 | hypothetical protein | - |
| LSL_RS00125 (LSL_1984) | 18177..18440 | + | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LSL_RS00130 (LSL_1985) | 18434..18778 | + | 345 | WP_011241744.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LSL_RS00135 | 18868..18930 | - | 63 | WP_143455695.1 | hypothetical protein | - |
| LSL_RS00140 (LSL_1986) | 19002..20222 | + | 1221 | WP_011241745.1 | IS256 family transposase ISCARN68 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus salivarius CECT 5713 | NC_017480 | 1..20426 | 0.006 |