MGE detailed information
MGE type: Genomic_island MGE length: 49891 bp
Accession: NC_006087 Location: 2297404..2347294 Organism: Leifsonia xyli subsp. xyli str. CTCB07 Replicon: chromosome
Accession: NC_006087 Location: 2297404..2347294 Organism: Leifsonia xyli subsp. xyli str. CTCB07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXX_RS10920 () | 2292584..2293657 | + | 1074 | WP_141692914.1 | ABC transporter substrate-binding protein | - |
| LXX_RS10925 () | 2293777..2295315 | + | 1539 | WP_041768534.1 | sugar ABC transporter ATP-binding protein | - |
| LXX_RS10930 () | 2295316..2296281 | + | 966 | Protein_2220 | ABC transporter permease | - |
| LXX_RS10935 () | 2296278..2297273 | + | 996 | WP_041767839.1 | ABC transporter permease | - |
| LXX_RS10940 () | 2297404..2297784 | - | 381 | WP_011186885.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LXX_RS10945 () | 2297845..2299431 | - | 1587 | WP_081423158.1 | amidase domain-containing protein | - |
| LXX_RS10950 () | 2299693..2300043 | - | 351 | WP_041767844.1 | hypothetical protein | - |
| LXX_RS10955 () | 2300040..2300315 | - | 276 | Protein_2225 | hypothetical protein | - |
| LXX_RS10965 () | 2300525..2301822 | - | 1298 | Protein_2226 | IS256 family transposase | - |
| LXX_RS10970 () | 2302101..2303033 | - | 933 | WP_141692911.1 | hypothetical protein | - |
| LXX_RS10975 () | 2303220..2303564 | + | 345 | WP_141692912.1 | hypothetical protein | - |
| LXX_RS12915 () | 2303775..2304620 | + | 846 | Protein_2229 | DUF1738 domain-containing protein | - |
| LXX_RS14530 () | 2304749..2304892 | + | 144 | WP_176714816.1 | hypothetical protein | - |
| LXX_RS10990 () | 2305209..2306087 | + | 879 | WP_076611640.1 | IS5 family transposase ISLxx6 | Transposase |
| LXX_RS10995 () | 2306097..2306708 | - | 612 | WP_050737938.1 | IS3 family transposase ISPst4 | Transposase |
| LXX_RS11000 () | 2307064..2308111 | + | 1048 | Protein_2233 | DUF1016 family protein | - |
| LXX_RS11005 () | 2308417..2308794 | + | 378 | WP_011186891.1 | hypothetical protein | - |
| LXX_RS12920 () | 2308941..2309459 | + | 519 | Protein_2235 | RES domain-containing protein | - |
| LXX_RS11015 () | 2310054..2310341 | + | 288 | WP_041767850.1 | hypothetical protein | - |
| LXX_RS13775 () | 2310362..2310589 | - | 228 | Protein_2237 | ATP-binding protein | - |
| LXX_RS11020 () | 2310623..2310922 | - | 300 | Protein_2238 | IS3 family transposase ISAar45 | Transposase |
| LXX_RS11025 () | 2310939..2312048 | - | 1110 | WP_011185382.1 | IS110 family transposase ISLxx2 | Transposase |
| LXX_RS11030 () | 2312601..2312822 | + | 222 | WP_011186894.1 | cold-shock protein | - |
| LXX_RS11035 () | 2312970..2314072 | + | 1103 | Protein_2241 | acyl-CoA desaturase | - |
| LXX_RS11040 () | 2314187..2314858 | + | 672 | WP_050737939.1 | IS256 family transposase ISArsp4 | Transposase |
| LXX_RS14950 () | 2314819..2314929 | + | 111 | WP_176714799.1 | hypothetical protein | - |
| LXX_RS14540 () | 2314949..2315116 | - | 168 | WP_155806824.1 | IS3 family transposase IS3501 | Transposase |
| LXX_RS12925 () | 2315530..2316171 | - | 642 | WP_050737940.1 | phosphatase PAP2 family protein | - |
| LXX_RS11050 () | 2317088..2318053 | + | 966 | WP_011186898.1 | IS481 family transposase ISMysp6 | Transposase |
| LXX_RS11055 () | 2318199..2318546 | + | 348 | WP_011186899.1 | hypothetical protein | - |
| LXX_RS11060 () | 2318707..2319570 | + | 864 | WP_041768556.1 | DMT family transporter | - |
| LXX_RS11070 () | 2319904..2320344 | - | 441 | WP_011186901.1 | universal stress protein | - |
| LXX_RS11075 () | 2320635..2321258 | - | 624 | WP_141692887.1 | DNA-binding transcriptional activator DevR/DosR | VF |
| LXX_RS12930 () | 2321442..2321750 | + | 309 | WP_068981872.1 | hypothetical protein | - |
| LXX_RS12935 () | 2321775..2321969 | + | 195 | WP_050737942.1 | GAF domain-containing protein | - |
| LXX_RS12940 () | 2322156..2322407 | + | 252 | WP_141692886.1 | hypothetical protein | - |
| LXX_RS11085 () | 2322653..2323864 | + | 1212 | WP_011185157.1 | IS30 family transposase ISLxx5 | Transposase |
| LXX_RS11090 () | 2323959..2324687 | + | 729 | WP_050737944.1 | two-component sensor histidine kinase | - |
| LXX_RS11095 () | 2324684..2325841 | + | 1158 | WP_011186904.1 | NAD(P) transhydrogenase subunit alpha | - |
| LXX_RS11100 () | 2325838..2326146 | + | 309 | WP_011186905.1 | NAD(P) transhydrogenase subunit alpha | - |
| LXX_RS11105 () | 2326146..2327564 | + | 1419 | WP_041767856.1 | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | - |
| LXX_RS11110 () | 2327614..2328816 | - | 1203 | WP_011186907.1 | IS110 family transposase IS900 | Transposase |
| LXX_RS11115 () | 2329051..2330580 | + | 1530 | WP_011186908.1 | aldehyde dehydrogenase family protein | - |
| LXX_RS11120 () | 2330619..2331647 | + | 1029 | WP_041767858.1 | Alcohol dehydrogenase | VF |
| LXX_RS11125 () | 2331649..2332137 | + | 489 | WP_050737945.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LXX_RS11130 () | 2332230..2333057 | - | 828 | Protein_2263 | ATP-binding protein | - |
| LXX_RS11135 () | 2333530..2334432 | - | 903 | WP_041767860.1 | L,D-transpeptidase | - |
| LXX_RS13785 () | 2334500..2335150 | - | 651 | WP_176714793.1 | beta-propeller fold lactonase family protein | - |
| LXX_RS11140 () | 2335510..2335734 | + | 225 | WP_011186914.1 | IS3 family transposase ISAcl2 | Transposase |
| LXX_RS13790 () | 2335746..2336174 | + | 429 | WP_041768562.1 | IS3 family transposase ISAcl2 | Transposase |
| LXX_RS13795 () | 2336505..2338130 | - | 1626 | WP_011186916.1 | cellulase family glycosylhydrolase | - |
| LXX_RS14550 () | 2338228..2338905 | - | 678 | WP_141692851.1 | hypothetical protein | - |
| LXX_RS11150 () | 2339179..2339445 | - | 267 | WP_011186917.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LXX_RS11155 () | 2339442..2339717 | - | 276 | WP_011186918.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LXX_RS14955 () | 2340286..2341544 | + | 1259 | Protein_2272 | IS21 family transposase | - |
| LXX_RS11165 () | 2341541..2342350 | + | 810 | WP_011185523.1 | IS21 family transposase ISLxx1 | Transposase |
| LXX_RS13815 () | 2342413..2342610 | + | 198 | Protein_2274 | transposase | - |
| LXX_RS11170 () | 2342825..2343247 | + | 423 | WP_011185689.1 | 18 kDa heat shock protein | VF |
| LXX_RS11175 () | 2343519..2344190 | - | 672 | WP_050737946.1 | hypothetical protein | - |
| LXX_RS11185 () | 2344794..2345042 | + | 249 | WP_176714791.1 | hypothetical protein | - |
| LXX_RS11190 () | 2345029..2345379 | + | 351 | WP_041767865.1 | hypothetical protein | - |
| LXX_RS11195 () | 2345383..2345646 | + | 264 | WP_050737947.1 | hypothetical protein | - |
| LXX_RS11205 () | 2346296..2347294 | + | 999 | Protein_2280 | IS481-like element ISLxx4 family transposase | - |
| LXX_RS11210 () | 2347291..2348349 | - | 1059 | Protein_2281 | NAD(P)/FAD-dependent oxidoreductase | - |
| LXX_RS11215 () | 2348501..2348722 | + | 222 | WP_011186921.1 | DUF3073 domain-containing protein | - |
| LXX_RS11220 () | 2348963..2350081 | - | 1119 | WP_011186922.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| LXX_RS14960 () | 2350149..2350511 | + | 363 | WP_141692871.1 | hypothetical protein | - |
| LXX_RS11225 () | 2350517..2352076 | - | 1560 | WP_011186923.1 | amidophosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|