MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 48508 bp
Accession: NC_005128 Location: 1..48508 Organism: Vibrio vulnificus YJ016 Replicon: plasmid pYJ016
Accession: NC_005128 Location: 1..48508 Organism: Vibrio vulnificus YJ016 Replicon: plasmid pYJ016
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJE04_RS00010 () | 530..754 | - | 225 | WP_043876991.1 | helix-turn-helix domain-containing protein | - |
| BJE04_RS00015 () | 1142..1669 | + | 528 | WP_011148976.1 | hypothetical protein | - |
| BJE04_RS00020 () | 1648..1824 | + | 177 | WP_011148977.1 | TraY domain-containing protein | - |
| BJE04_RS00025 () | 2190..2477 | + | 288 | WP_011148979.1 | type IV conjugative transfer system pilin TraA | - |
| BJE04_RS00030 () | 2487..2789 | + | 303 | WP_011148980.1 | type IV conjugative transfer system protein TraL | - |
| BJE04_RS00035 () | 2804..3379 | + | 576 | WP_039543307.1 | type IV conjugative transfer system protein TraE | - |
| BJE04_RS00040 () | 3366..4151 | + | 786 | WP_011148982.1 | type-F conjugative transfer system secretin TraK | - |
| BJE04_RS00045 () | 4141..5673 | + | 1533 | WP_043876992.1 | conjugal transfer protein TraB | - |
| BJE04_RS00050 () | 5679..6071 | + | 393 | WP_011148984.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BJE04_RS00055 () | 6084..8633 | + | 2550 | WP_043876993.1 | type IV secretion system protein TraC | - |
| BJE04_RS00060 () | 8617..9315 | + | 699 | WP_043876994.1 | type-F conjugative transfer system protein TraW | - |
| BJE04_RS00065 () | 9312..10322 | + | 1011 | WP_011148987.1 | conjugal transfer pilus assembly protein TraU | - |
| BJE04_RS00070 () | 10332..10565 | + | 234 | WP_011148988.1 | hypothetical protein | - |
| BJE04_RS00075 () | 10579..11292 | + | 714 | WP_011148989.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BJE04_RS00080 () | 11329..13053 | + | 1725 | WP_043876995.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BJE04_RS00085 () | 13100..13879 | + | 780 | WP_193343203.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BJE04_RS00090 () | 13897..14310 | + | 414 | WP_011148993.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BJE04_RS00095 () | 14307..15713 | + | 1407 | WP_011148994.1 | conjugal transfer protein TraH | - |
| BJE04_RS00100 () | 15717..18527 | + | 2811 | WP_011148995.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BJE04_RS00105 () | 18610..19143 | + | 534 | WP_011148996.1 | hypothetical protein | - |
| BJE04_RS00110 () | 19460..21565 | + | 2106 | WP_043876997.1 | type IV conjugative transfer system coupling protein TraD | - |
| BJE04_RS00115 () | 21699..27473 | + | 5775 | WP_011149001.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| BJE04_RS00120 () | 27492..27851 | - | 360 | WP_011149002.1 | hypothetical protein | - |
| BJE04_RS00125 () | 28409..28855 | - | 447 | WP_011149004.1 | hypothetical protein | VF |
| BJE04_RS00130 () | 28937..30319 | - | 1383 | WP_011149005.1 | DUF3560 domain-containing protein | - |
| BJE04_RS00135 () | 30895..31191 | - | 297 | WP_011149007.1 | putative addiction module antidote protein | Antitoxin Detail |
| BJE04_RS00140 () | 31267..31566 | - | 300 | WP_011149008.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BJE04_RS00145 () | 31604..31822 | - | 219 | WP_011149010.1 | hypothetical protein | - |
| BJE04_RS25110 () | 31867..32019 | - | 153 | WP_167524319.1 | hypothetical protein | - |
| BJE04_RS00150 () | 32038..32361 | - | 324 | WP_043876998.1 | hypothetical protein | - |
| BJE04_RS00155 () | 32428..32736 | - | 309 | WP_011149014.1 | DUF1738 domain-containing protein | - |
| BJE04_RS00160 () | 32739..33242 | - | 504 | WP_011149015.1 | hypothetical protein | - |
| BJE04_RS00165 () | 33795..34052 | - | 258 | WP_011149016.1 | hypothetical protein | - |
| BJE04_RS00170 () | 34091..34399 | - | 309 | WP_011149017.1 | hypothetical protein | - |
| BJE04_RS00180 () | 34978..35274 | - | 297 | WP_011149018.1 | hypothetical protein | - |
| BJE04_RS00185 () | 35383..35721 | - | 339 | WP_011149019.1 | hypothetical protein | - |
| BJE04_RS00190 () | 35741..36220 | - | 480 | WP_011149021.1 | hypothetical protein | - |
| BJE04_RS00195 () | 36637..37125 | - | 489 | WP_011149022.1 | hypothetical protein | - |
| BJE04_RS24770 () | 37143..37295 | - | 153 | WP_155116711.1 | hypothetical protein | - |
| BJE04_RS00200 () | 37304..37870 | - | 567 | WP_011149024.1 | hypothetical protein | - |
| BJE04_RS00210 () | 38258..38677 | - | 420 | WP_043877000.1 | hypothetical protein | - |
| BJE04_RS00215 () | 38911..39288 | - | 378 | WP_011149028.1 | hypothetical protein | - |
| BJE04_RS00220 () | 39447..39641 | - | 195 | WP_011149030.1 | hypothetical protein | - |
| BJE04_RS00230 () | 39988..40659 | - | 672 | WP_011149032.1 | site-specific integrase | - |
| BJE04_RS00235 () | 40847..41989 | + | 1143 | WP_011149033.1 | GIY-YIG nuclease family protein | - |
| BJE04_RS00240 () | 43002..43502 | - | 501 | WP_043877001.1 | hypothetical protein | - |
| BJE04_RS25115 () | 44214..44390 | - | 177 | WP_166735633.1 | hypothetical protein | - |
| BJE04_RS00250 () | 44546..44764 | - | 219 | WP_043877002.1 | hypothetical protein | - |
| BJE04_RS00255 () | 44766..45401 | - | 636 | WP_039508107.1 | AAA family ATPase | - |
| BJE04_RS00260 () | 45675..45857 | + | 183 | WP_011149040.1 | type II toxin-antitoxin system HicA family toxin | - |
| BJE04_RS00265 () | 45879..46304 | + | 426 | WP_011149041.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| BJE04_RS00270 () | 47028..47858 | - | 831 | WP_043877003.1 | hypothetical protein | - |
| BJE04_RS24775 () | 47845..47985 | - | 141 | WP_011149044.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|