MGE detailed information
MGE type: Prophage MGE length: 49354 bp
Accession: NC_004741 Location: 295042..344395 Organism: Shigella flexneri 2a str. 2457T Replicon: chromosome
Accession: NC_004741 Location: 295042..344395 Organism: Shigella flexneri 2a str. 2457T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S_RS01495 () | 290134..290904 | - | 771 | WP_001139559.1 | 2-oxoglutaramate amidase | - |
| S_RS01500 () | 291085..291531 | + | 447 | WP_005100645.1 | Ivy family C-type lysozyme inhibitor | - |
| S_RS01505 () | 291574..294018 | - | 2445 | WP_000973114.1 | acyl-CoA dehydrogenase FadE | - |
| S_RS01510 () | 294258..294836 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| S_RS01515 () | 295042..295809 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| S_RS01520 () | 295780..296520 | - | 741 | WP_001225676.1 | murein L,D-transpeptidase | - |
| S_RS01525 () | 296904..297425 | + | 522 | Protein_277 | hypothetical protein | VF |
| S_RS01530 () | 297601..298098 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| S_RS01535 () | 298315..300027 | - | 1713 | Protein_279 | Flagellar biosynthesis protein FlhA | VF |
| S_RS01540 () | 299999..300784 | + | 786 | WP_000207560.1 | Chemotaxis protein LafU | VF |
| S_RS01545 () | 300855..301910 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| S_RS01550 () | 301962..302255 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| S_RS01555 () | 302258..302656 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| S_RS01560 () | 302666..303118 | + | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| S_RS01565 () | 303364..304407 | + | 1044 | WP_005053205.1 | RNA ligase RtcB family protein | - |
| S_RS01570 () | 304469..305083 | + | 615 | Protein_286 | peptide chain release factor H | - |
| S_RS01575 () | 305140..306597 | - | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| S_RS01580 () | 306859..307317 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| S_RS01585 () | 307409..308653 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| - () | 307913..307993 | + | 81 | NuclAT_8 | - | - |
| - () | 307913..307993 | + | 81 | NuclAT_8 | - | - |
| - () | 307913..307993 | + | 81 | NuclAT_8 | - | - |
| - () | 307913..307993 | + | 81 | NuclAT_8 | - | - |
| S_RS01590 () | 308711..309112 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| S_RS01595 () | 309151..310206 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| S_RS24905 () | 310382..311079 | + | 698 | Protein_292 | IS1 family transposase IS1X2 | Transposase |
| S_RS01610 () | 311270..312373 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| S_RS01615 () | 312385..313638 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| S_RS01625 () | 313843..315006 | - | 1164 | WP_000051892.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| S_RS01635 () | 315192..316348 | + | 1157 | WP_094099483.1 | IS3 family transposase ISSd1 | Transposase |
| S_RS01640 () | 316401..317051 | + | 651 | WP_000554647.1 | hypothetical protein | - |
| S_RS01645 () | 317023..317456 | + | 434 | Protein_298 | tail fiber assembly protein | - |
| S_RS01650 () | 318229..319278 | - | 1050 | WP_000282635.1 | acyltransferase family protein | - |
| S_RS01655 () | 319729..320919 | + | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| S_RS01660 () | 321309..322769 | - | 1461 | WP_000590789.1 | hypothetical protein | VF |
| S_RS01665 () | 322766..323695 | - | 930 | WP_000703658.1 | Prophage bactoprenol glucosyl transferase | VF |
| S_RS01670 () | 323692..324054 | - | 363 | WP_000915845.1 | Prophage bactoprenol-linked glucose translocase | VF |
| S_RS01675 () | 324316..324672 | - | 357 | Protein_304 | integrase | - |
| S_RS01690 () | 326060..327223 | + | 1164 | WP_000051894.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| S_RS01695 () | 327572..328744 | + | 1173 | WP_000551008.1 | acyltransferase | - |
| S_RS01700 () | 328798..329421 | - | 624 | WP_005060548.1 | hypothetical protein | - |
| S_RS24615 () | 329548..330745 | - | 1198 | Protein_309 | IS3 family transposase | - |
| S_RS01715 () | 330729..331929 | - | 1201 | Protein_310 | IS3 family transposase IS629 | Transposase |
| S_RS01725 () | 332080..333195 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| S_RS01730 () | 333212..334021 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| S_RS01735 () | 334141..334599 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| S_RS01740 () | 334782..335306 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| S_RS01745 () | 335356..335547 | + | 192 | WP_001142439.1 | protein YaiA | - |
| S_RS01755 () | 335805..336482 | + | 678 | WP_001276420.1 | AroM family protein | - |
| S_RS01760 () | 336554..336838 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| S_RS01765 () | 336993..337328 | + | 336 | Protein_318 | DUF2773 domain-containing protein | - |
| S_RS01770 () | 337325..337780 | + | 456 | WP_000194195.1 | hypothetical protein | - |
| S_RS01775 () | 337858..338769 | - | 912 | WP_005053105.1 | recombination-associated protein RdgC | - |
| S_RS01780 () | 338894..339787 | + | 894 | WP_001219334.1 | fructokinase | - |
| S_RS01785 () | 339945..341126 | - | 1182 | WP_005053102.1 | MFS transporter AraJ | - |
| S_RS01790 () | 341252..344395 | - | 3144 | WP_000698943.1 | exonuclease subunit SbcC | - |
| S_RS01795 () | 344392..345594 | - | 1203 | WP_001221306.1 | exonuclease subunit SbcD | - |
| S_RS01800 () | 345784..346473 | + | 690 | WP_000113938.1 | phosphate response regulator transcription factor PhoB | - |
| S_RS01805 () | 346531..347826 | + | 1296 | WP_000893611.1 | phosphate regulon sensor histidine kinase PhoR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|