MGE detailed information
MGE type: Prophage MGE length: 28348 bp
Accession: NC_004741 Location: 1604045..1632392 Organism: Shigella flexneri 2a str. 2457T Replicon: chromosome
Accession: NC_004741 Location: 1604045..1632392 Organism: Shigella flexneri 2a str. 2457T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S_RS08670 () | 1600707..1602353 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| S_RS08675 () | 1602410..1602703 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| S_RS08680 () | 1602700..1603989 | - | 1290 | WP_001278539.1 | FAD-dependent oxidoreductase | - |
| S_RS08685 () | 1604045..1604983 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| S_RS08690 () | 1605003..1605767 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| S_RS08700 () | 1606086..1606586 | + | 501 | WP_000284805.1 | cupin domain-containing protein | - |
| S_RS25660 () | 1606620..1607315 | + | 696 | Protein_1589 | IS1 family transposase IS1X2 | Transposase |
| S_RS08710 () | 1607309..1607476 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| S_RS08715 () | 1607878..1608639 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| S_RS08720 () | 1608707..1608910 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| S_RS08725 () | 1609158..1611437 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| S_RS08730 () | 1611771..1612520 | - | 750 | Protein_1594 | Type 1 fimbrin D-mannose specific adhesin | VF |
| S_RS08740 () | 1612576..1613273 | + | 698 | Protein_1595 | IS1 family transposase IS1X2 | Transposase |
| S_RS08745 () | 1613289..1614194 | + | 906 | Protein_1596 | IS3 family transposase IS600 | Transposase |
| S_RS08750 () | 1614219..1614398 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| S_RS28345 () | 1614548..1614709 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| S_RS08755 () | 1614706..1614894 | - | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| S_RS08760 () | 1615154..1615489 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| S_RS27675 () | 1615770..1615878 | - | 109 | Protein_1601 | DUF3927 family protein | - |
| S_RS08790 () | 1616799..1617620 | - | 822 | WP_000762882.1 | antitermination protein | - |
| S_RS08795 () | 1617635..1617991 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| S_RS08800 () | 1618004..1619053 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| S_RS08805 () | 1619055..1619333 | - | 279 | Protein_1605 | hypothetical protein | - |
| S_RS08810 () | 1619400..1619651 | - | 252 | WP_000980987.1 | hypothetical protein | - |
| S_RS08815 () | 1619869..1620024 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| S_RS08820 () | 1620096..1620383 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| S_RS08825 () | 1620383..1620622 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| S_RS25680 () | 1621926..1622204 | + | 279 | WP_014532248.1 | hypothetical protein | - |
| S_RS08850 () | 1623419..1624438 | + | 1020 | Protein_1613 | MHS family MFS transporter YdfJ | - |
| S_RS08855 () | 1624527..1625987 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| S_RS08860 () | 1626023..1626226 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| S_RS08865 () | 1626404..1627090 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| S_RS08870 () | 1627179..1627925 | - | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| S_RS08875 () | 1628062..1630107 | + | 2046 | WP_005050102.1 | peptidyl-dipeptidase Dcp | - |
| S_RS08880 () | 1630152..1630670 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| S_RS08885 () | 1630946..1631170 | + | 225 | Protein_1620 | YdeI family stress tolerance OB fold protein | - |
| S_RS25695 () | 1631236..1632392 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| S_RS28850 () | 1632537..1632640 | - | 104 | Protein_1622 | protein MgtT | - |
| S_RS08900 () | 1632640..1632735 | - | 96 | WP_000901367.1 | protein MgtS | - |
| S_RS08905 () | 1632862..1633980 | - | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| S_RS08910 () | 1634244..1635143 | + | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| S_RS08915 () | 1635174..1635392 | - | 219 | WP_000803661.1 | multiple antibiotic resistance protein MarB | - |
| S_RS08920 () | 1635424..1635807 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| S_RS08925 () | 1635827..1636261 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| S_RS08930 () | 1636473..1637138 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|