MGE detailed information
MGE type: Mobilizable plasmid MGE length: 14155 bp
Accession: NC_004734 Location: 1..14155 Organism: Acidithiobacillus caldus Replicon: plasmid pTC-F14
Accession: NC_004734 Location: 1..14155 Organism: Acidithiobacillus caldus Replicon: plasmid pTC-F14
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKK01_RS00010 (pTC-F14_p01) | 197..859 | - | 663 | WP_011110522.1 | hypothetical protein | - |
| HKK01_RS00015 (pTC-F14_p02) | 852..1532 | - | 681 | WP_011110523.1 | hypothetical protein | - |
| HKK01_RS00020 (pTC-F14_p03) | 1529..1924 | - | 396 | WP_011110524.1 | histone-like mobilization protein | - |
| HKK01_RS00025 (pTC-F14_p04) | 2209..2520 | + | 312 | WP_011110525.1 | ribbon-helix-helix protein, CopG family | - |
| HKK01_RS00030 (pTC-F14_p05) | 2510..5179 | + | 2670 | WP_011110526.1 | hypothetical protein | Relaxase |
| HKK01_RS00035 (pTC-F14_p07) | 5234..5458 | + | 225 | WP_011110518.1 | DUF6290 family protein | Antitoxin Detail |
| HKK01_RS00040 (pTC-F14_p08) | 5442..5714 | + | 273 | WP_011110519.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HKK01_RS00045 (pTC-F14_p09) | 5831..6706 | + | 876 | WP_011110520.1 | helicase RepA family protein | - |
| HKK01_RS00050 (pTC-F14_p10) | 6788..7681 | + | 894 | WP_168940533.1 | replication protein C, IncQ-type | - |
| HKK01_RS00055 (pTC-F14_p11) | 8100..8474 | + | 375 | WP_011110527.1 | DNA-binding protein | - |
| HKK01_RS00060 (pTC-F14_p12) | 8489..9058 | - | 570 | WP_011110528.1 | Tn3 family transposase ISPsy42 | Transposase |
| HKK01_RS00090 | 9156..9341 | - | 186 | Protein_12 | base excision DNA repair protein | - |
| HKK01_RS00065 (pTC-F14_p13) | 9342..9800 | - | 459 | WP_168940534.1 | carboxymuconolactone decarboxylase family protein | - |
| HKK01_RS00070 (pTC-F14_p14) | 10521..11381 | - | 861 | WP_011110530.1 | hypothetical protein | - |
| HKK01_RS00075 | 11693..11917 | + | 225 | WP_250697586.1 | restriction endonuclease | - |
| HKK01_RS00080 (pTC-F14_p15) | 11931..13145 | - | 1215 | WP_011110531.1 | ISL3 family transposase ISAtc1 | Transposase |
| HKK01_RS00085 | 13201..13665 | - | 465 | WP_168940531.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|