MGE detailed information
MGE type: Genomic_island MGE length: 50295 bp
Accession: NC_004556 Location: 2442712..2493006 Organism: Xylella fastidiosa Temecula1 Replicon: chromosome
Accession: NC_004556 Location: 2442712..2493006 Organism: Xylella fastidiosa Temecula1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PD_RS10890 () | 2441120..2441974 | + | 855 | WP_004087478.1 | pyrroline-5-carboxylate reductase | - |
| PD_RS10895 () | 2442712..2445318 | + | 2607 | WP_004087477.1 | TonB-dependent receptor | - |
| PD_RS10900 () | 2445405..2447159 | + | 1755 | WP_004087476.1 | alpha-L-fucosidase | - |
| PD_RS10910 () | 2448222..2448449 | + | 228 | WP_004087472.1 | hypothetical protein | - |
| PD_RS10915 () | 2448479..2448661 | + | 183 | WP_004087470.1 | hypothetical protein | - |
| PD_RS10920 () | 2448661..2448864 | + | 204 | WP_004087466.1 | hypothetical protein | - |
| PD_RS10925 () | 2448941..2449366 | - | 426 | WP_011098356.1 | hypothetical protein | - |
| PD_RS12855 () | 2449747..2449959 | - | 213 | WP_042466539.1 | hypothetical protein | - |
| PD_RS10935 () | 2450105..2453200 | - | 3096 | WP_004087462.1 | type I restriction endonuclease subunit R | - |
| PD_RS10940 () | 2453187..2454521 | - | 1335 | WP_011098357.1 | restriction endonuclease subunit S | - |
| PD_RS10945 () | 2454521..2456902 | - | 2382 | WP_011098358.1 | type I restriction-modification system subunit M | - |
| PD_RS10950 () | 2456914..2457618 | - | 705 | WP_012382783.1 | HNH endonuclease family protein | - |
| PD_RS10955 () | 2457629..2460652 | - | 3024 | WP_012382784.1 | type I restriction endonuclease subunit R | - |
| PD_RS10960 () | 2460649..2461866 | - | 1218 | WP_004087452.1 | restriction endonuclease subunit S | - |
| PD_RS10965 () | 2461863..2462129 | - | 267 | WP_012382785.1 | hypothetical protein | - |
| PD_RS10970 () | 2462126..2463709 | - | 1584 | WP_011098361.1 | type I restriction-modification system subunit M | - |
| PD_RS10975 () | 2464237..2464839 | + | 603 | WP_004087444.1 | LysE family translocator | - |
| PD_RS12310 () | 2465295..2465778 | + | 484 | Protein_2124 | hypothetical protein | - |
| PD_RS10985 () | 2465784..2467316 | + | 1533 | WP_004087440.1 | DUF3375 domain-containing protein | - |
| PD_RS10990 () | 2467297..2468010 | + | 714 | WP_004087438.1 | DUF4194 domain-containing protein | - |
| PD_RS10995 () | 2468003..2471434 | + | 3432 | WP_004087437.1 | ATP-binding protein | - |
| PD_RS11000 () | 2471431..2472636 | + | 1206 | WP_004087436.1 | hypothetical protein | - |
| PD_RS11005 () | 2472939..2473193 | - | 255 | WP_004087435.1 | hypothetical protein | - |
| PD_RS12860 () | 2473156..2473305 | - | 150 | WP_014607527.1 | hypothetical protein | - |
| PD_RS11010 () | 2473322..2474215 | - | 894 | WP_004087434.1 | DUF769 domain-containing protein | - |
| PD_RS11015 () | 2474220..2474471 | + | 252 | WP_014607528.1 | hypothetical protein | - |
| PD_RS12560 () | 2474575..2474871 | + | 297 | WP_161594835.1 | hypothetical protein | - |
| PD_RS11020 () | 2474831..2475781 | - | 951 | WP_004087430.1 | COG2958 family protein | - |
| PD_RS12565 () | 2476151..2476621 | + | 471 | WP_147420295.1 | hypothetical protein | - |
| PD_RS11030 () | 2476618..2477223 | - | 606 | WP_004090246.1 | hypothetical protein | - |
| PD_RS11035 () | 2477799..2478680 | + | 882 | WP_004090247.1 | hypothetical protein | - |
| PD_RS11040 () | 2478753..2479646 | + | 894 | WP_004090250.1 | hypothetical protein | - |
| PD_RS11045 () | 2479753..2480217 | + | 465 | WP_011098369.1 | hypothetical protein | - |
| PD_RS11050 () | 2480238..2480747 | + | 510 | WP_004090253.1 | hypothetical protein | - |
| PD_RS11055 () | 2480749..2481333 | + | 585 | WP_004090255.1 | hypothetical protein | - |
| PD_RS12320 () | 2481349..2481564 | + | 216 | WP_011098370.1 | hypothetical protein | - |
| PD_RS11060 () | 2481568..2482080 | + | 513 | WP_011098371.1 | hypothetical protein | - |
| PD_RS11065 () | 2482077..2482874 | + | 798 | WP_004090261.1 | hypothetical protein | - |
| PD_RS11070 () | 2483105..2483983 | + | 879 | WP_004090262.1 | hypothetical protein | - |
| PD_RS11075 () | 2484056..2484940 | + | 885 | WP_004090263.1 | hypothetical protein | - |
| PD_RS11080 () | 2484943..2487942 | + | 3000 | WP_011098373.1 | hypothetical protein | VF |
| PD_RS11085 () | 2488515..2489276 | - | 762 | WP_004090267.1 | Bax inhibitor-1/YccA family protein | - |
| PD_RS11110 () | 2490468..2491871 | + | 1404 | WP_011098374.1 | hypothetical protein | - |
| PD_RS11115 () | 2491945..2492253 | - | 309 | WP_004085003.1 | putative addiction module antidote protein | Antitoxin Detail |
| PD_RS11120 () | 2492257..2492556 | - | 300 | WP_011098375.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PD_RS11125 () | 2492644..2493189 | + | 546 | WP_011098376.1 | hypothetical protein | - |
| PD_RS12865 () | 2493201..2493344 | + | 144 | WP_155115087.1 | hypothetical protein | - |
| PD_RS11130 () | 2493497..2493877 | - | 381 | WP_004089371.1 | DUF596 domain-containing protein | - |
| PD_RS11135 () | 2493882..2495012 | - | 1131 | WP_011098377.1 | DUF769 domain-containing protein | - |
| PD_RS11140 () | 2495320..2495700 | - | 381 | WP_004087391.1 | DUF596 domain-containing protein | - |
| PD_RS11145 () | 2495712..2497286 | - | 1575 | Protein_2157 | DUF637 domain-containing protein | - |
| PD_RS11150 () | 2497462..2497839 | - | 378 | WP_011098380.1 | DUF596 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|