MGE detailed information
MGE type: Prophage MGE length: 18300 bp
Accession: NC_004556 Location: 1376468..1394767 Organism: Xylella fastidiosa Temecula1 Replicon: chromosome
Accession: NC_004556 Location: 1376468..1394767 Organism: Xylella fastidiosa Temecula1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PD_RS06175 () | 1372474..1372965 | - | 492 | WP_172632657.1 | glutathione peroxidase | - |
| PD_RS06180 () | 1373810..1374685 | + | 876 | WP_004087352.1 | ABC transporter ATP-binding protein | - |
| PD_RS06185 () | 1374682..1375659 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| PD_RS06190 () | 1375918..1376364 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| PD_RS06195 () | 1376468..1377712 | - | 1245 | WP_011097983.1 | phage tail protein | - |
| PD_RS06200 () | 1377716..1378276 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| PD_RS06205 () | 1378273..1379418 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| PD_RS06210 () | 1379517..1379813 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PD_RS06215 () | 1379817..1380122 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| PD_RS06220 () | 1380133..1380486 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| PD_RS06225 () | 1380483..1381124 | - | 642 | WP_004090764.1 | hypothetical protein | - |
| PD_RS06230 () | 1381121..1381951 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| PD_RS06235 () | 1381948..1382265 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| PD_RS06240 () | 1382265..1383035 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| PD_RS06245 () | 1383083..1383373 | + | 291 | WP_004087089.1 | hypothetical protein | - |
| PD_RS06250 () | 1383357..1383623 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PD_RS06255 () | 1383634..1385523 | - | 1890 | WP_011097989.1 | hypothetical protein | - |
| PD_RS06260 () | 1385671..1386093 | - | 423 | WP_004085005.1 | hypothetical protein | - |
| PD_RS06265 () | 1386090..1386527 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| PD_RS06270 () | 1386537..1386758 | - | 222 | Protein_1214 | DUF3383 domain-containing protein | - |
| PD_RS06275 () | 1386787..1387992 | - | 1206 | Protein_1215 | IS607 family transposase ISCARN56 | Transposase |
| PD_RS06280 () | 1387986..1388591 | - | 606 | Protein_1216 | IS607 family transposase | - |
| PD_RS06285 () | 1388602..1389201 | + | 600 | WP_080502629.1 | hypothetical protein | - |
| PD_RS06290 () | 1389198..1389476 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PD_RS06295 () | 1389478..1389840 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| PD_RS06300 () | 1389925..1391343 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| PD_RS12720 () | 1391340..1391504 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| PD_RS06305 () | 1391497..1391754 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| PD_RS06310 () | 1391744..1392763 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PD_RS06315 () | 1392830..1394767 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| PD_RS06320 () | 1394929..1397310 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| PD_RS06325 () | 1397400..1398068 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|