MGE detailed information
MGE type: Prophage MGE length: 45864 bp
Accession: NC_004337 Location: 2045222..2091085 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Accession: NC_004337 Location: 2045222..2091085 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF2016 () | 2040270..2040941 | - | 672 | NP_707854.2 | transcriptional regulatory protein YedW | - |
| SF2017 () | 2041074..2041487 | + | 414 | NP_707855.1 | 5-hydroxyisourate hydrolase | - |
| SF2019 () | 2042601..2043236 | + | 636 | NP_707856.1 | sulfite oxidase subunit YedZ | - |
| SF2020 () | 2043494..2044144 | + | 651 | NP_707857.1 | zinc/cadmium-binding protein | - |
| SF2020a () | 2045222..2045491 | - | 270 | YP_008439260.1 | tail fiber assembly protein | - |
| SF2021 () | 2045548..2046216 | + | 669 | NP_707858.1 | hypothetical protein | - |
| SF2023 () | 2047252..2048460 | + | 1209 | NP_707859.1 | IS4 family transposase IS10R | Transposase |
| SF2024 () | 2049693..2050307 | - | 615 | NP_707860.2 | hypothetical protein | - |
| SF2025 () | 2050213..2051031 | - | 819 | NP_707861.2 | IS3 family transposase IS600 | Transposase |
| SF2026 () | 2051322..2051825 | + | 504 | NP_707862.1 | IS1 family transposase IS1X2 | Transposase |
| SF2027 () | 2051918..2052400 | - | 483 | NP_707863.1 | hypothetical protein | - |
| SF2028 () | 2052468..2054417 | - | 1950 | NP_707864.1 | tail protein | - |
| SF2029 () | 2054502..2054837 | - | 336 | NP_707865.1 | bacteriophage protein | - |
| SF2030 () | 2054837..2055193 | - | 357 | NP_707866.1 | bacteriophage protein | - |
| SF2031 () | 2055193..2056689 | - | 1497 | NP_707867.1 | sheath protein | - |
| SF2033 () | 2057241..2058059 | - | 819 | NP_707869.1 | IS3 family transposase IS600 | Transposase |
| SF2034 () | 2058095..2058397 | - | 303 | NP_707870.1 | IS3 family transposase ISSfl10 | Transposase |
| SF2036 () | 2059296..2059643 | - | 348 | NP_707872.1 | IS66 family transposase ISSfl3 | Transposase |
| SF2037 () | 2059640..2060314 | - | 675 | NP_707873.1 | IS66 family transposase ISSfl3 | Transposase |
| SF2038 () | 2060413..2060628 | - | 216 | NP_707874.1 | lysis protein S | - |
| SF2039 () | 2061429..2062112 | - | 684 | NP_707875.2 | Q antiterminator of prophage | - |
| SF2040 () | 2062109..2062474 | - | 366 | NP_707876.1 | crossover junction endodeoxyribonuclease | - |
| SF2041 () | 2062475..2063461 | - | 987 | NP_707877.2 | bacteriophage protein | - |
| SF2042 () | 2063535..2063813 | - | 279 | NP_707878.1 | hypothetical protein | - |
| SF2042a () | 2063616..2063939 | + | 324 | YP_008439261.1 | hypothetical protein | - |
| SF2042b () | 2063981..2064193 | - | 213 | YP_008439262.1 | regulatory protein | Toxin Detail |
| - () | 2064148..2064206 | + | 59 | - | - | Antitoxin Detail |
| SF2042c () | 2064396..2064614 | - | 219 | YP_008439263.1 | membrane protein | - |
| SF2043 () | 2064788..2065123 | - | 336 | NP_707879.2 | bacteriophage protein | - |
| SF2045 () | 2066593..2067429 | + | 837 | NP_707881.1 | DgsA anti-repressor MtfA | - |
| SF2048 () | 2069136..2069975 | - | 840 | NP_707884.1 | IS3 family transposase ISLad1 | Transposase |
| SF2049 () | 2070002..2070340 | - | 339 | NP_707885.1 | IS3 family transposase IS911 | Transposase |
| SF2051 () | 2070931..2071233 | + | 303 | NP_707886.1 | IS3 family transposase ISSfl10 | Transposase |
| SF2052 () | 2071269..2072060 | + | 792 | NP_707887.1 | IS3 family transposase ISSfl10 | Transposase |
| SF2053 () | 2072412..2073866 | + | 1455 | NP_707888.2 | AMP nucleosidase | - |
| SF2054 () | 2074209..2074925 | + | 717 | NP_707889.1 | putative transcriptional regulatory protein YeeN | VF |
| SF2056 () | 2077302..2078252 | - | 951 | NP_707890.1 | transcriptional regulator Cbl | - |
| SF2057 () | 2078354..2079271 | - | 918 | NP_707891.2 | nitrogen assimilation transcriptional regulator | - |
| SF2058 () | 2079731..2080666 | - | 936 | NP_707892.1 | L,D-transpeptidase | - |
| SF2059 () | 2080728..2081807 | - | 1080 | NP_707893.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| SF2060 () | 2081819..2082562 | - | 744 | NP_707894.2 | adenosylcobinamide-GDP ribazoletransferase | - |
| SF2061 () | 2082559..2083068 | - | 510 | NP_707895.1 | adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase | - |
| SF2062 () | 2083080..2083898 | - | 819 | NP_707896.1 | IS3 family transposase IS600 | Transposase |
| SF2063 () | 2083934..2084236 | - | 303 | NP_707897.1 | IS3 family transposase ISSfl10 | Transposase |
| SF2064 () | 2084479..2084805 | + | 327 | NP_707898.1 | IS3 family transposase IS629 | Transposase |
| SF2065 () | 2085020..2085688 | + | 669 | NP_707899.1 | IS3 family transposase IS629 | Transposase |
| SF2066 () | 2085910..2086392 | + | 483 | NP_707900.1 | hypothetical protein | - |
| SF2067 () | 2086551..2086946 | - | 396 | NP_707901.1 | hypothetical protein | - |
| SF2069 () | 2087163..2087783 | + | 621 | NP_707902.1 | IS3 family transposase IS629 | Transposase |
| SF2070 () | 2088328..2089752 | + | 1425 | NP_707903.1 | exonuclease I | - |
| SF2071 () | 2089795..2090022 | - | 228 | NP_707904.1 | hypothetical protein | - |
| SF2072 () | 2090036..2091094 | - | 1059 | NP_707905.1 | transport system permease | - |
| SF2073 () | 2091273..2092631 | - | 1359 | NP_707906.1 | amino acid/amine transport protein | - |
| SF2074 () | 2092844..2093827 | - | 984 | NP_707907.2 | LysR family transcriptional regulator | - |
| SF2075 () | 2093873..2094697 | - | 825 | NP_707908.1 | sugar metabolism protein | - |
| SF2076 () | 2094780..2095034 | - | 255 | NP_707909.1 | hypothetical protein | - |
| SF2077 () | 2095056..2095451 | - | 396 | NP_707910.1 | insertion element IS1 protein InsB | - |
| SF2078 () | 2095478..2095753 | - | 276 | NP_707911.1 | insertion element IS1 protein InsA | - |
| SF2079 () | 2095787..2096059 | - | 273 | NP_707912.1 | antitoxin YefM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|