MGE detailed information
MGE type: Prophage MGE length: 67615 bp
Accession: NC_004337 Location: 1878093..1945707 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Accession: NC_004337 Location: 1878093..1945707 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF1834 () | 1873663..1874478 | + | 816 | NP_707689.3 | hypothetical protein | - |
| SF1834a () | 1874808..1875011 | + | 204 | YP_008439256.1 | hypothetical protein | - |
| SF1835 () | 1875022..1875537 | + | 516 | NP_707690.1 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase | - |
| SF1836 () | 1875732..1876484 | + | 753 | NP_707691.2 | fumarate/nitrate reduction transcriptional regulator | - |
| SF1837 () | 1876636..1877586 | + | 951 | NP_707692.2 | universal stress protein UspE | - |
| SF1838 () | 1878093..1878932 | - | 840 | NP_707693.1 | IS3 family transposase ISLad1 | Transposase |
| SF1839 () | 1878959..1879261 | - | 303 | NP_707694.1 | IS3 family transposase IS911 | Transposase |
| SF1840 () | 1879389..1880420 | + | 1032 | NP_707695.1 | hypothetical protein | - |
| SF1841 () | 1880471..1882105 | - | 1635 | NP_707696.1 | transport protein | - |
| SF1843 () | 1882952..1883254 | + | 303 | NP_707697.1 | IS3 family transposase ISSfl10 | Transposase |
| SF1846 () | 1884174..1884500 | - | 327 | NP_707700.1 | IS3 family transposase IS1203 | Transposase |
| SF1847 () | 1884585..1885403 | + | 819 | NP_707701.1 | IS3 family transposase ISSd1 | Transposase |
| - () | 1886975..1887209 | + | 235 | - | - | Antitoxin Detail |
| - () | 1886976..1887079 | - | 104 | - | - | Toxin Detail |
| SF1850 () | 1887237..1887578 | - | 342 | NP_707703.1 | hypothetical protein | - |
| SF1852 () | 1888467..1888841 | - | 375 | NP_707704.1 | hypothetical protein | - |
| SF1853 () | 1888980..1889210 | + | 231 | NP_707705.2 | DNA polymerase III subunit theta | - |
| SF1855 () | 1889992..1890654 | + | 663 | NP_707706.2 | exodeoxyribonuclease X | - |
| SF1856 () | 1890651..1892711 | - | 2061 | NP_707707.1 | protease 2 | - |
| SF1857 () | 1892921..1893580 | - | 660 | NP_707708.1 | hypothetical protein | - |
| SF1858 () | 1893907..1894263 | - | 357 | NP_707709.2 | hypothetical protein | - |
| SF1859 () | 1894754..1895932 | + | 1179 | NP_707710.1 | phosphoribosylglycinamide formyltransferase 2 | - |
| SF1860 () | 1895988..1896629 | - | 642 | NP_707711.1 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase | - |
| SF1861 () | 1896666..1898477 | - | 1812 | NP_707712.1 | phosphogluconate dehydratase | - |
| SF1862 () | 1898712..1900187 | - | 1476 | YP_004797676.1 | glucose-6-phosphate dehydrogenase | - |
| SF1862a () | 1900353..1900502 | - | 150 | YP_008439257.1 | hypothetical protein | - |
| SF1863 () | 1900525..1901394 | + | 870 | NP_707713.1 | DNA-binding transcriptional regulator HexR | - |
| SF1864 () | 1901522..1902964 | + | 1443 | NP_707714.2 | pyruvate kinase | - |
| SF1865 () | 1903095..1904066 | - | 972 | NP_707715.1 | Lipid A biosynthesis myristoyltransferase 1 | VF |
| SF1866 () | 1904186..1905508 | - | 1323 | NP_707716.1 | peptidase | - |
| SF1868 () | 1905524..1906582 | - | 1059 | NP_707717.3 | adhesin | - |
| SF1867 () | 1906535..1907290 | + | 756 | NP_707718.1 | Zinc import ATP-binding protein ZnuC | VF |
| SF1870 () | 1908218..1909228 | - | 1011 | NP_707720.1 | Holliday junction DNA helicase RuvB | - |
| SF1871 () | 1909237..1909848 | - | 612 | NP_707721.1 | Holliday junction DNA helicase RuvA | - |
| SF1872 () | 1910052..1910723 | + | 672 | NP_707722.3 | hypothetical protein | - |
| SF1873 () | 1910725..1911246 | - | 522 | NP_707723.2 | Holliday junction resolvase | - |
| SF1875 () | 1912051..1912533 | - | 483 | NP_707724.2 | dihydroneopterin triphosphate pyrophosphatase | - |
| SF1876 () | 1912621..1914393 | - | 1773 | NP_707725.1 | aspartyl-tRNA synthetase | - |
| SF1878 () | 1915149..1916345 | + | 1197 | NP_707726.1 | IS110 family transposase ISSfl4 | Transposase |
| SF1879 () | 1917074..1917322 | + | 249 | NP_707727.1 | bacteriophage protein | - |
| SF1880 () | 1917922..1919673 | + | 1752 | NP_707728.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| SF1881 () | 1919853..1920476 | - | 624 | NP_707729.1 | prophage CP-933K tail protein | - |
| SF1883 () | 1921902..1922501 | - | 600 | NP_707731.1 | Outer membrane protein X | VF |
| SF1884 () | 1922569..1926048 | - | 3480 | NP_707732.1 | host specificity protein | - |
| SF1885 () | 1926109..1926651 | - | 543 | NP_707733.2 | phage tail protein | - |
| SF1886 () | 1926648..1927247 | - | 600 | NP_707734.2 | tail assembly protein | - |
| SF1887 () | 1927396..1928094 | - | 699 | NP_707735.1 | minor tail protein | - |
| SF1888 () | 1928094..1928423 | - | 330 | NP_707736.1 | minor tail protein | - |
| SF1889 () | 1928423..1931464 | - | 3042 | NP_707737.1 | tail length tape measure protein | - |
| SF1890 () | 1931436..1931711 | - | 276 | NP_707738.2 | prophage CP-933K tail protein | - |
| SF1891 () | 1931774..1932160 | - | 387 | NP_707739.2 | prophage CP-933K tail protein | - |
| SF1892 () | 1932219..1932959 | - | 741 | NP_707740.2 | prophage CP-933K tail protein | - |
| SF1893 () | 1932970..1933371 | - | 402 | NP_707741.1 | prophage CP-933K tail protein | - |
| SF1894 () | 1933368..1933958 | - | 591 | NP_707742.1 | prophage CP-933K tail protein | - |
| SF1895 () | 1933945..1934316 | - | 372 | NP_707743.1 | tail attachment protein | - |
| SF1896 () | 1934328..1934729 | - | 402 | NP_707744.1 | DNA-packaging protein | - |
| SF1897 () | 1934993..1936189 | + | 1197 | NP_707745.1 | IS110 family transposase ISSfl4 | Transposase |
| SF1898 () | 1937375..1938064 | - | 690 | NP_707746.2 | hypothetical protein | VF |
| SF1899 () | 1938061..1938420 | - | 360 | NP_707747.1 | crossover junction endodeoxyribonuclease | - |
| SF1900 () | 1938624..1938926 | + | 303 | NP_707748.1 | IS3 family transposase ISSfl10 | Transposase |
| SF1901 () | 1938962..1939780 | + | 819 | NP_707749.1 | IS3 family transposase ISSd1 | Transposase |
| SF1902 () | 1940293..1940796 | - | 504 | NP_707750.2 | IS1 family transposase IS1R | Transposase |
| SF1904 () | 1941076..1941903 | + | 828 | NP_707752.1 | serine protease | - |
| SF1905 () | 1941947..1942696 | + | 750 | NP_707753.2 | bacteriophage protein | - |
| SF1906 () | 1942693..1943262 | + | 570 | NP_707754.1 | bacteriophage protein | - |
| SF1906a () | 1943386..1943628 | + | 243 | YP_008439258.1 | hypothetical protein | - |
| SF1907 () | 1943959..1944798 | - | 840 | NP_707755.1 | IS3 family transposase ISLad1 | Transposase |
| SF1908 () | 1944825..1945163 | - | 339 | NP_707756.1 | IS3 family transposase IS911 | Transposase |
| SF1910 () | 1945760..1946155 | + | 396 | NP_707757.2 | hypothetical protein | - |
| SF1911 () | 1946196..1946939 | + | 744 | NP_707758.1 | tRNA cmo(5)U34 methyltransferase | - |
| SF1912 () | 1946936..1947907 | + | 972 | NP_707759.1 | tRNA mo(5)U34 methyltransferase | - |
| SF1913 () | 1948072..1950501 | - | 2430 | NP_707760.2 | biotin sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|