MGE detailed information
MGE type: Prophage MGE length: 57086 bp
Accession: NC_003295 Location: 861647..918732 Organism: Ralstonia solanacearum GMI1000 Replicon: chromosome
Accession: NC_003295 Location: 861647..918732 Organism: Ralstonia solanacearum GMI1000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS_RS04070 () | 856775..857002 | + | 228 | WP_003263554.1 | sulfurtransferase TusA family protein | - |
| RS_RS04075 () | 857016..857387 | - | 372 | WP_011000764.1 | cytochrome c | - |
| RS_RS04080 () | 857398..858647 | - | 1250 | Protein_825 | molybdopterin-dependent oxidoreductase | - |
| RS_RS04085 () | 858719..859351 | - | 633 | WP_011000767.1 | LysE family translocator | - |
| RS_RS04090 () | 859740..860138 | + | 399 | WP_011000768.1 | RcnB family protein | - |
| RS_RS04095 () | 860216..860467 | - | 252 | Protein_828 | helix-turn-helix transcriptional regulator | - |
| RS_RS04100 () | 860631..861251 | + | 621 | WP_011000770.1 | glutathione transferase GstA | - |
| RS_RS04105 () | 861647..862453 | + | 807 | WP_028860305.1 | endoglucanase | - |
| RS_RS04110 () | 862468..862683 | - | 216 | WP_071654075.1 | ester cyclase | - |
| RS_RS04115 () | 862903..863502 | - | 600 | WP_016727157.1 | TetR/AcrR family transcriptional regulator | - |
| RS_RS04120 () | 863636..864364 | + | 729 | WP_011000774.1 | nitroreductase family protein | - |
| RS_RS25350 () | 864385..864690 | + | 306 | WP_011000775.1 | hypothetical protein | - |
| RS_RS26560 () | 865719..865823 | - | 105 | Protein_835 | IS3 family transposase | - |
| RS_RS04125 () | 867210..868316 | + | 1107 | WP_011000779.1 | type III secretion system YopJ family effector PopP1 | - |
| RS_RS04130 () | 868653..869465 | - | 813 | WP_011000780.1 | alpha/beta fold hydrolase | - |
| RS_RS27105 () | 869567..869923 | + | 357 | WP_162014406.1 | hypothetical protein | - |
| RS_RS04145 () | 871128..872081 | + | 954 | WP_011000783.1 | hypothetical protein | - |
| RS_RS04150 () | 872261..874870 | + | 2610 | WP_011000784.1 | preprotein translocase subunit SecA | - |
| RS_RS04155 () | 875334..876083 | + | 750 | WP_043876558.1 | phospholipase D family protein | - |
| RS_RS04160 () | 876464..876754 | + | 291 | WP_011000786.1 | helix-turn-helix domain-containing protein | - |
| RS_RS04165 () | 876751..877248 | + | 498 | WP_011000787.1 | hypothetical protein | - |
| RS_RS04170 () | 877245..878117 | + | 873 | WP_011000788.1 | ATP-binding protein | - |
| RS_RS04175 () | 878135..878767 | + | 633 | WP_011000789.1 | hypothetical protein | - |
| RS_RS04180 () | 878777..879244 | + | 468 | WP_043876559.1 | hypothetical protein | - |
| RS_RS04185 () | 879250..879648 | + | 399 | WP_043876560.1 | hypothetical protein | - |
| RS_RS04190 () | 879632..881929 | + | 2298 | WP_011000792.1 | hypothetical protein | - |
| RS_RS04195 () | 882161..882373 | + | 213 | WP_011000793.1 | hypothetical protein | - |
| RS_RS04200 () | 882363..882770 | + | 408 | WP_011000794.1 | hypothetical protein | - |
| RS_RS04205 () | 883334..884656 | + | 1323 | WP_011000796.1 | IS5 family transposase ISRso9 | Transposase |
| RS_RS04210 () | 884696..886060 | + | 1365 | Protein_853 | site-specific DNA-methyltransferase | - |
| RS_RS04215 () | 886057..887292 | + | 1236 | WP_011000798.1 | site-specific DNA-methyltransferase | - |
| RS_RS04220 () | 887252..887497 | - | 246 | WP_043876561.1 | hypothetical protein | - |
| RS_RS04225 () | 887600..887965 | - | 366 | WP_043876562.1 | hypothetical protein | - |
| RS_RS04230 () | 888190..888378 | - | 189 | WP_011000801.1 | hypothetical protein | - |
| RS_RS04235 () | 888477..888827 | - | 351 | WP_043876718.1 | hypothetical protein | - |
| RS_RS04240 () | 888955..889449 | - | 495 | WP_011000803.1 | DUF3489 domain-containing protein | - |
| RS_RS04245 () | 889539..889811 | - | 273 | WP_011000804.1 | hypothetical protein | - |
| RS_RS04250 () | 889905..890441 | + | 537 | WP_011000805.1 | hypothetical protein | - |
| RS_RS04255 () | 890441..892423 | + | 1983 | WP_011000806.1 | phage terminase large subunit family protein | - |
| RS_RS04260 () | 892467..892976 | + | 510 | WP_011000807.1 | phage portal protein | - |
| RS_RS04265 () | 892987..893379 | + | 393 | WP_011000808.1 | hypothetical protein | - |
| RS_RS04270 () | 893380..893601 | + | 222 | WP_011000809.1 | hypothetical protein | - |
| RS_RS04275 () | 893601..895127 | + | 1527 | WP_011000810.1 | phage portal protein | - |
| RS_RS04280 () | 895137..896387 | + | 1251 | WP_011000811.1 | S49 family peptidase | - |
| RS_RS04285 () | 896397..896774 | + | 378 | WP_011000812.1 | head decoration protein | - |
| RS_RS04290 () | 896781..897785 | + | 1005 | WP_011000813.1 | major capsid protein | - |
| RS_RS04295 () | 897788..898090 | + | 303 | WP_011000814.1 | hypothetical protein | - |
| RS_RS04300 () | 898096..898542 | + | 447 | WP_011000815.1 | hypothetical protein | - |
| RS_RS04305 () | 898665..899438 | + | 774 | WP_011000816.1 | hypothetical protein | - |
| RS_RS04310 () | 899447..899836 | + | 390 | WP_043876563.1 | hypothetical protein | - |
| RS_RS04315 () | 899833..900054 | + | 222 | WP_011000818.1 | hypothetical protein | - |
| RS_RS04320 () | 900029..900673 | + | 645 | WP_011000819.1 | hypothetical protein | - |
| RS_RS04325 () | 900716..901006 | - | 291 | WP_011000820.1 | DNA-binding protein Bv3F | VF |
| RS_RS04330 () | 901192..902658 | - | 1467 | WP_043876564.1 | type III secretion system YopJ family effector PopP2 | - |
| RS_RS25365 () | 903269..904396 | + | 1128 | WP_080511079.1 | DNA cytosine methyltransferase | - |
| RS_RS04340 () | 904468..904881 | - | 414 | WP_011000824.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RS_RS04345 () | 904878..905129 | - | 252 | WP_011000825.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RS_RS04350 () | 905209..909309 | + | 4101 | WP_011000826.1 | tape measure protein | - |
| RS_RS04355 () | 909315..909710 | + | 396 | WP_011000827.1 | hypothetical protein | - |
| RS_RS04360 () | 909711..913301 | + | 3591 | WP_011000828.1 | hypothetical protein | - |
| RS_RS04365 () | 913313..914479 | + | 1167 | WP_043876720.1 | hypothetical protein | - |
| RS_RS04370 () | 914483..914965 | + | 483 | WP_011000830.1 | hypothetical protein | - |
| RS_RS04375 () | 914962..915360 | + | 399 | WP_011000831.1 | hypothetical protein | - |
| RS_RS04380 () | 915365..917209 | + | 1845 | WP_011000832.1 | hypothetical protein | - |
| RS_RS04385 () | 917219..917443 | + | 225 | WP_011000833.1 | hypothetical protein | - |
| RS_RS04390 () | 917511..917801 | + | 291 | WP_003270772.1 | membrane protein | - |
| RS_RS04395 () | 917798..918274 | + | 477 | WP_011000834.1 | hypothetical protein | - |
| RS_RS04400 () | 918271..918732 | + | 462 | WP_011000835.1 | lysozyme | - |
| RS_RS04405 () | 918800..919099 | + | 300 | WP_043876721.1 | hypothetical protein | - |
| RS_RS04410 () | 919162..919500 | - | 339 | WP_011000837.1 | DUF1484 domain-containing protein | - |
| RS_RS04415 () | 919924..920871 | - | 948 | WP_011000838.1 | COG2958 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|