MGE detailed information
MGE type: Prophage MGE length: 47963 bp
Accession: NC_003295 Location: 1782376..1830338 Organism: Ralstonia solanacearum GMI1000 Replicon: chromosome
Accession: NC_003295 Location: 1782376..1830338 Organism: Ralstonia solanacearum GMI1000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS_RS08335 () | 1778487..1781606 | + | 3120 | WP_011001595.1 | efflux RND transporter permease subunit | - |
| RS_RS08345 () | 1781995..1782999 | + | 1005 | WP_011001596.1 | hypothetical protein ; Integrase | Integrase |
| RS_RS25480 () | 1783000..1783308 | - | 309 | WP_080511061.1 | hypothetical protein | - |
| RS_RS25175 () | 1783362..1784927 | - | 1566 | WP_011001597.1 | hypothetical protein | - |
| RS_RS08360 () | 1784929..1785729 | - | 801 | WP_011001598.1 | PRTRC system ThiF family protein | - |
| RS_RS08365 () | 1785726..1786511 | - | 786 | WP_011001599.1 | PRTRC system protein A | - |
| RS_RS08370 () | 1786513..1787235 | - | 723 | WP_011001600.1 | PRTRC system protein B | - |
| RS_RS08375 () | 1787243..1788292 | - | 1050 | WP_011001601.1 | PRTRC system protein F | - |
| RS_RS08380 () | 1788289..1788678 | - | 390 | WP_011001602.1 | PRTRC system protein C | - |
| RS_RS08385 () | 1788691..1789284 | - | 594 | WP_011001603.1 | PRTRC system protein E | - |
| RS_RS08390 () | 1789310..1789546 | - | 237 | WP_011001604.1 | hypothetical protein | - |
| RS_RS08395 () | 1789543..1789974 | - | 432 | WP_011001605.1 | hypothetical protein | - |
| RS_RS08400 () | 1789984..1790199 | - | 216 | WP_011001606.1 | hypothetical protein | - |
| RS_RS27210 () | 1790205..1790357 | - | 153 | WP_011001607.1 | hypothetical protein | - |
| RS_RS08405 () | 1790354..1790791 | - | 438 | WP_011001608.1 | hypothetical protein | - |
| RS_RS08410 () | 1790788..1791162 | - | 375 | WP_011001609.1 | hypothetical protein | - |
| RS_RS26730 () | 1791171..1791308 | - | 138 | WP_157048845.1 | hypothetical protein | - |
| RS_RS08415 () | 1791856..1792161 | - | 306 | WP_011001611.1 | hypothetical protein | - |
| RS_RS26735 () | 1793029..1793487 | - | 459 | WP_011001614.1 | hypothetical protein | - |
| RS_RS25490 () | 1793626..1794150 | - | 525 | WP_078222094.1 | helix-turn-helix domain-containing protein | - |
| RS_RS08435 () | 1794707..1795210 | + | 504 | WP_011001616.1 | hypothetical protein | - |
| RS_RS08440 () | 1795207..1795617 | + | 411 | WP_011001617.1 | hypothetical protein | - |
| RS_RS08445 () | 1795626..1795823 | + | 198 | WP_011001618.1 | hypothetical protein | - |
| RS_RS08450 () | 1795820..1796854 | + | 1035 | WP_043876600.1 | hypothetical protein | - |
| RS_RS08455 () | 1796851..1797147 | + | 297 | WP_011001619.1 | hypothetical protein | - |
| RS_RS08460 () | 1797171..1797773 | + | 603 | WP_011001620.1 | hypothetical protein | - |
| RS_RS08465 () | 1797957..1798331 | + | 375 | WP_011001621.1 | HNH endonuclease | - |
| RS_RS08470 () | 1798755..1799096 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| RS_RS08475 () | 1799141..1800811 | + | 1671 | WP_043876602.1 | terminase large subunit | - |
| RS_RS27215 () | 1800814..1800972 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| RS_RS08485 () | 1800969..1802192 | + | 1224 | WP_011001623.1 | phage portal protein | - |
| RS_RS08490 () | 1802200..1802811 | + | 612 | WP_011001624.1 | HK97 family phage prohead protease | - |
| RS_RS08495 () | 1802822..1804060 | + | 1239 | WP_011001625.1 | phage major capsid protein | - |
| RS_RS08500 () | 1804094..1804417 | + | 324 | WP_011001626.1 | head-tail connector protein | - |
| RS_RS08505 () | 1804425..1804751 | + | 327 | WP_011001627.1 | phage head closure protein | - |
| RS_RS08510 () | 1804754..1805257 | + | 504 | WP_011001628.1 | hypothetical protein | - |
| RS_RS08515 () | 1805247..1805600 | + | 354 | WP_011001629.1 | DUF3168 domain-containing protein | - |
| RS_RS08520 () | 1805664..1806317 | + | 654 | WP_011001630.1 | phage tail protein | - |
| RS_RS08525 () | 1806323..1806643 | + | 321 | WP_043876603.1 | hypothetical protein | - |
| RS_RS08530 () | 1806691..1806951 | + | 261 | WP_080511062.1 | DUF1799 domain-containing protein | - |
| RS_RS08535 () | 1806953..1809826 | + | 2874 | WP_011001631.1 | phage tail tape measure protein | - |
| RS_RS08540 () | 1809829..1810167 | + | 339 | WP_011001632.1 | phage tail protein | - |
| RS_RS08545 () | 1810164..1810841 | + | 678 | WP_011001633.1 | phage tail protein | - |
| RS_RS08550 () | 1810847..1811443 | + | 597 | WP_011001634.1 | tail fiber assembly protein | - |
| RS_RS08555 () | 1811440..1812141 | + | 702 | WP_011001635.1 | phage minor tail protein L | - |
| RS_RS08560 () | 1812143..1812853 | + | 711 | WP_011001636.1 | C40 family peptidase | - |
| RS_RS08565 () | 1812857..1813459 | + | 603 | WP_011001637.1 | tail assembly protein | - |
| RS_RS08570 () | 1813529..1813867 | - | 339 | WP_011001638.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| RS_RS08575 () | 1813864..1814118 | - | 255 | WP_043876605.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| RS_RS08580 () | 1814170..1817325 | + | 3156 | WP_011001639.1 | host specificity protein J | - |
| RS_RS08585 () | 1817325..1817636 | + | 312 | WP_043876606.1 | hypothetical protein | - |
| RS_RS08590 () | 1817662..1818318 | + | 657 | WP_011001640.1 | hypothetical protein | - |
| RS_RS08595 () | 1818387..1818878 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| RS_RS08600 () | 1818878..1819186 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| RS_RS08605 () | 1819189..1819464 | + | 276 | WP_011001643.1 | hypothetical protein | - |
| RS_RS08610 () | 1819464..1820009 | + | 546 | WP_011001644.1 | lysis protein | - |
| RS_RS08615 () | 1820273..1821238 | - | 966 | WP_011001645.1 | IS5 family transposase ISRso18 | Transposase |
| RS_RS26740 () | 1821305..1822375 | - | 1071 | WP_071623775.1 | hypothetical protein | - |
| RS_RS08620 () | 1822504..1822773 | - | 270 | WP_119918759.1 | hypothetical protein | - |
| RS_RS08625 () | 1822838..1823875 | - | 1038 | WP_043876739.1 | LysM peptidoglycan-binding domain-containing protein | - |
| RS_RS08630 () | 1824372..1824566 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| RS_RS08635 () | 1824638..1826611 | + | 1974 | WP_011001650.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| RS_RS08640 () | 1826866..1828215 | + | 1350 | WP_011001651.1 | trigger factor | - |
| RS_RS08645 () | 1828245..1828898 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| RS_RS08650 () | 1829064..1830338 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| RS_RS08655 () | 1830509..1832929 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| RS_RS08660 () | 1833103..1833375 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|