MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93933 bp
Accession: NC_003277 Location: 1..93933 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Replicon: plasmid pSLT
Accession: NC_003277 Location: 1..93933 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Replicon: plasmid pSLT
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSLT001 () | 94..378 | + | 285 | NP_490493.1 | putative cytoplasmic protein | - |
| PSLT002 () | 712..1155 | + | 444 | NP_490494.1 | putative phospholipase D | - |
| PSLT003 () | 1334..1600 | + | 267 | NP_490495.1 | DNA replication | - |
| PSLT004 () | 1723..1845 | + | 123 | NP_490496.1 | DNA replication | - |
| PSLT005 () | 1850..1927 | + | 78 | NP_490497.1 | replication of plasmid | - |
| PSLT006 () | 1908..2789 | + | 882 | NP_490498.3 | DNA replication | - |
| PSLT007 () | 3730..3870 | + | 141 | NP_490499.1 | putative outer membrane protein | - |
| PSLT008 () | 3967..4725 | - | 759 | NP_490500.1 | sdiA-regulated gene;putative bacterial regulatory helix-turn-helix proteins, araC family | - |
| PSLT009 () | 4992..5549 | - | 558 | NP_490501.1 | resistance to complement killing | - |
| PSLT010 () | 5639..6538 | - | 900 | NP_490502.1 | sdiA-regulated gene; putative outer membrane protein | - |
| PSLT011 () | 6671..7324 | - | 654 | NP_490503.1 | sdiA-regulated gene; putative thiol-disulfide isomerase or thioredoxin | - |
| PSLT012 () | 7569..7919 | - | 351 | NP_490504.1 | putative bacterial regulatory proteins, luxR family | - |
| PSLT013 () | 7904..8116 | - | 213 | NP_490505.1 | plasmid-encoded fimbriae; regulatory | - |
| PSLT014 () | 8548..9423 | - | 876 | NP_490506.1 | putative outer membrane protein | - |
| PSLT015 () | 9676..10233 | - | 558 | NP_490507.1 | putative outer membrane protein | - |
| PSLT016 () | 10248..10940 | - | 693 | NP_490508.1 | plasmid-encoded fimbriae;chaperone | - |
| PSLT017 () | 10933..13341 | - | 2409 | NP_490509.1 | plasmid-encoded fimbriae; usher protein | - |
| PSLT018 () | 13569..14087 | - | 519 | NP_490510.1 | plasmid-encoded fimbriae; major fimbrial subunit | - |
| PSLT019 () | 14362..14664 | - | 303 | NP_490511.1 | plasmid-encoded fimbriae;regulation | - |
| PSLT020 () | 15561..15764 | + | 204 | NP_490512.1 | hypothetical protein | - |
| PSLT023 () | 16636..17625 | - | 990 | NP_490513.1 | DNA replication | - |
| PSLT024 () | 17369..17677 | + | 309 | NP_490514.1 | hypothetical protein | - |
| PSLT025 () | 18119..18415 | - | 297 | NP_490515.1 | putative cytoplasmic protein | - |
| PSLT026 () | 18899..19420 | - | 522 | NP_490516.1 | putative periplasmic protein | - |
| PSLT027 () | 20096..20314 | + | 219 | NP_490517.1 | toxin addiction system: antidote | Antitoxin Detail |
| PSLT028 () | 20316..20621 | + | 306 | NP_490518.1 | toxin addiction system: toxin | Toxin Detail |
| PSLT029 () | 20623..20913 | + | 291 | NP_490519.1 | putative cytoplasmic protein | - |
| PSLT030 () | 20910..21431 | + | 522 | NP_490520.1 | putative cytoplasmic protein | - |
| PSLT031 () | 21466..22248 | + | 783 | NP_490521.1 | resolvase | - |
| PSLT032 () | 22257..22808 | + | 552 | NP_490522.1 | putative diguanylate cyclase/phosphodiesterase | - |
| PSLT033 () | 23477..23962 | + | 486 | NP_490523.1 | putative inner membrane protein | - |
| PSLT034 () | 24682..25242 | + | 561 | NP_490524.1 | putative adhesin | - |
| PSLT035 () | 25309..25659 | - | 351 | NP_490525.1 | putative transposase | - |
| PSLT036 () | 25877..26140 | + | 264 | NP_490526.1 | putative transposase, IS200-like | - |
| PSLT037 () | 26267..26917 | - | 651 | NP_490527.1 | Salmonella plasmid virulence: hydrophilic protein | - |
| PSLT038 () | 27178..27903 | - | 726 | NP_490528.1 | Salmonella plasmid virulence: hydrophilic protein | - |
| PSLT039 () | 28185..29960 | - | 1776 | NP_490529.1 | Salmonella plasmid virulence: hydrophilic protein | - |
| PSLT040 () | 30142..30909 | - | 768 | NP_490530.1 | Salmonella plasmid virulence: outer membrane protein | - |
| PSLT041 () | 31421..32314 | - | 894 | NP_490531.1 | Salmonella plasmid virulence: regulation of spv operon, lysR family | - |
| PSLT042 () | 32923..33960 | + | 1038 | NP_490532.1 | putative integrase protein | - |
| PSLT043 () | 34149..35174 | - | 1026 | NP_490533.1 | putative phosphoribulokinase / uridine kinase family | - |
| PSLT044 () | 35107..36771 | - | 1665 | NP_490534.1 | putative integrase protein | - |
| PSLT045 () | 36755..37315 | - | 561 | NP_490535.1 | putative resolvase | - |
| PSLT046 () | 37522..38262 | - | 741 | NP_490536.1 | putative carbonic anhydrase | - |
| PSLT047 () | 38917..39405 | - | 489 | NP_490537.1 | putative cytoplasmic protein | - |
| PSLT048 () | 39664..40779 | + | 1116 | NP_490538.1 | alpha-helical coiled coil protein | - |
| PSLT049 () | 40865..41281 | + | 417 | NP_490539.1 | putative DNA polymerase III epsilon subunit (3'-5' exonuclease) | - |
| PSLT050 () | 40975..41301 | - | 327 | NP_490540.1 | putative cytoplasmic protein | - |
| PSLT051 () | 42455..43396 | - | 942 | NP_490541.1 | putative cytoplasmic protein | - |
| PSLT052 () | 43811..45016 | + | 1206 | NP_490542.1 | plasmid partition protein A | - |
| PSLT053 () | 45013..45990 | + | 978 | NP_490543.1 | plasmid partition protein B | - |
| PSLT054 () | 46072..47346 | - | 1275 | NP_490544.1 | mutagenesis by UV and mutagens; related to umuDC operon | - |
| PSLT055 () | 47346..47768 | - | 423 | NP_490545.1 | mutagenesis by UV and mutagens; related to umuDC operon | - |
| PSLT056 () | 48279..48749 | + | 471 | NP_490546.1 | putative cytoplasmic protein | - |
| PSLT057 () | 48742..49098 | + | 357 | NP_490547.1 | putative cytoplasmic protein | - |
| PSLT059 () | 49480..50160 | + | 681 | NP_490548.1 | putative adenine-specific DNA methylase | - |
| PSLT060 () | 50160..50381 | + | 222 | NP_490549.1 | putative cytoplasmic protein | - |
| PSLT061 () | 50922..51686 | + | 765 | NP_490550.1 | putative inner membrane protein | - |
| PSLT062 () | 52182..52616 | + | 435 | NP_490551.1 | putative cytoplasmic protein | - |
| PSLT063 () | 52683..53117 | + | 435 | NP_490552.1 | putative cytoplasmic protein | - |
| PSLT064 () | 53353..53676 | + | 324 | NP_490553.1 | putative inner membrane protein | - |
| PSLT066 () | 54395..54913 | + | 519 | NP_490554.1 | single-strand binding protein | - |
| PSLT067 () | 54968..55210 | + | 243 | NP_490555.1 | putative cytoplasmic protein | - |
| PSLT068 () | 55279..57276 | + | 1998 | NP_490556.1 | putative ParB-like nuclease domain | - |
| PSLT069 () | 57316..57750 | + | 435 | NP_490557.1 | Plasmid SOS inhibition | - |
| PSLT070 () | 57747..58484 | + | 738 | NP_490558.1 | Plasmid SOS inhibition | - |
| PSLT072 () | 60123..60593 | - | 471 | NP_490559.1 | putative transglycosylase | - |
| PSLT073 () | 61008..61388 | + | 381 | NP_490560.1 | conjugative transfer: mating signal | - |
| PSLT075 () | 61581..62267 | + | 687 | NP_490561.1 | conjugative transfer: regulation | - |
| PSLT076 () | 62268..62588 | + | 321 | NP_490562.1 | conjugative transfer: oriT nicking | - |
| PSLT077 () | 62630..62992 | + | 363 | NP_490563.1 | conjugative transfer: fimbrial subunit | - |
| PSLT078 () | 63007..63318 | + | 312 | NP_490564.1 | conjugative transfer: assembly | - |
| PSLT079 () | 63340..63906 | + | 567 | NP_490565.1 | conjugative transfer: assembly | - |
| PSLT080 () | 63893..64633 | + | 741 | NP_490566.1 | conjugative transfer: assembly | - |
| PSLT081 () | 64633..66054 | + | 1422 | NP_490567.1 | conjugative transfer: assembly | - |
| PSLT082 () | 66044..66640 | + | 597 | NP_490568.1 | conjugative transfer | - |
| PSLT083 () | 66618..66863 | + | 246 | NP_490569.1 | conjugative transfer protein | - |
| PSLT084 () | 66860..67375 | + | 516 | NP_490570.1 | conjugative transfer: assembly | - |
| PSLT085 () | 67510..67731 | + | 222 | NP_490571.1 | conjugative transfer | - |
| PSLT087 () | 67724..68191 | + | 468 | NP_490572.1 | conjugative transfer protein | - |
| PSLT088 () | 68587..71235 | + | 2649 | NP_490573.1 | conjugative transfer: assembly | - |
| PSLT089 () | 71210..71596 | + | 387 | NP_490574.1 | conjugative transfer | - |
| PSLT091 () | 71593..72225 | + | 633 | NP_490575.1 | conjugative transfer: assembly | - |
| PSLT092 () | 72222..73214 | + | 993 | NP_490576.1 | conjugative transfer: assembly | - |
| PSLT093 () | 73233..73541 | + | 309 | NP_490577.1 | conjugative transfer protein | - |
| PSLT094 () | 73526..74164 | + | 639 | NP_490578.1 | conjugative transfer: assembly | - |
| PSLT095 () | 74617..76443 | + | 1827 | NP_490579.1 | conjugative transfer: aggregate stability | - |
| PSLT096 () | 76454..76669 | + | 216 | NP_490580.1 | conjugative transfer | - |
| PSLT097 () | 76681..77430 | + | 750 | NP_490581.1 | conjugative transfer: assembly | - |
| PSLT098 () | 77644..77937 | + | 294 | NP_490582.1 | conjugative transfer: fimbrial synthesis | - |
| PSLT099 () | 77924..78472 | + | 549 | NP_490583.1 | conjugative transfer | - |
| PSLT100 () | 78462..79844 | + | 1383 | NP_490584.1 | conjugative transfer: assembly | - |
| PSLT101 () | 79841..82663 | + | 2823 | NP_490585.1 | conjugative transfer: assembly abd aggregate stability | - |
| PSLT102 () | 82679..83173 | + | 495 | NP_490586.1 | conjugative transfer: surface exclusion | - |
| PSLT103 () | 83209..83940 | + | 732 | NP_490587.1 | conjugative transfer: surface exclusion | - |
| PSLT104 () | 84317..86560 | + | 2244 | NP_490588.1 | conjugative transfer: DNA transport | - |
| PSLT105 () | 86560..87279 | + | 720 | NP_490589.1 | conjugative transfer | - |
| PSLT106 () | 86569..86967 | - | 399 | NP_490590.1 | homologue of mvpA, Shigella flexneri | - |
| PSLT107 () | 86967..87197 | - | 231 | NP_490591.1 | putative cytoplasmic protein | - |
| PSLT108 () | 87276..92534 | + | 5259 | NP_490592.1 | conjugative transfer: oriT nicking-unwinding | - |
| PSLT110 () | 92554..93294 | + | 741 | NP_490593.1 | conjugative transfer: fimbrial acetylation | - |
| PSLT111 () | 93349..93912 | + | 564 | NP_490594.1 | conjugative transfer: regulation | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|