MGE detailed information
MGE type: IS/Tn MGE length: 558 bp
Accession: NC_002490 Location: 18343..18900 Organism: Xylella fastidiosa 9a5c Replicon: plasmid pXF51
Accession: NC_002490 Location: 18343..18900 Organism: Xylella fastidiosa 9a5c Replicon: plasmid pXF51
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XF_RS12220 () | 15175..17466 | + | 2292 | WP_010895214.1 | hypothetical protein | - |
| XF_RS12225 () | 17463..17660 | + | 198 | WP_042464033.1 | hypothetical protein | - |
| XF_RS12230 () | 17741..17983 | + | 243 | WP_042464081.1 | hypothetical protein | - |
| XF_RS12240 () | 18343..18900 | - | 558 | WP_042464084.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| XF_RS12245 () | 18959..19243 | - | 285 | WP_143707262.1 | hypothetical protein | - |
| XF_RS12250 () | 19412..19831 | - | 420 | WP_010895219.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XF_RS12255 () | 19831..20070 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| XF_RS12260 () | 20466..20738 | + | 273 | WP_010895220.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| XF_RS12265 () | 20735..21220 | + | 486 | WP_010895221.1 | GNAT family N-acetyltransferase | Toxin Detail |
| XF_RS12270 () | 21694..21966 | - | 273 | WP_010895222.1 | DUF4190 domain-containing protein | - |
| XF_RS12275 () | 22031..22357 | - | 327 | WP_010895223.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| XF_RS12280 () | 22344..22574 | - | 231 | WP_042464041.1 | hypothetical protein | - |
| XF_RS12285 () | 22854..23099 | - | 246 | Protein_27 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XF_RS12290 () | 23143..23310 | - | 168 | WP_042464043.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XF_RS12295 () | 23298..23551 | - | 254 | Protein_29 | CopG family ribbon-helix-helix protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|