SecReT4
Effector Protein ID: 54295232
T4SS name [ID]Dot/Icm [41]
Gene symbolsdbC
Locus taglpl2315
StrainLegionella pneumophila str. Lens
Repliconchromosome [GenBank: NC_006369] [Browse all T4SS(s) in this replicon]
Location [Strand]2638570..2639874 [-]
ProductSdbC proteins, substrate of the Dot/Icm system
Effector typeProtein
DescriptonSdbC
T4CP requirementT4CP Depedent
Target/EffectionUnknown
UniProt IDQ5WU56
KEGG IDlpf:lpl2315
PDB IDNA
Domain hit(s) vs Pfam NA
Protein Sequence: 434 a.a.     [Download]
>gi|54295232|ref|YP_127647.1| SdbC proteins, substrate of the Dot/Icm system [Legionella pneumophila str. Lens]
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQLSGIDFHRFE
IEVTLANQKTCMTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHY
YAFEYPGMRKLGGEVLEVNDMVNTGIVLANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVR
CILNNTFSTFQAAVEGNLGAFSTLRYTVRPLLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATL
AESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQGIRFLETKYGRNSDGQLDTHLADLYLLKYDT
GLGVYESFICKYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSVLPSRPSIAGFFGRPKPVKDE
VDSENQAQKSIELK
-
Nucleotide Sequence: 1305 bp     [Download]
>gi|54292964|ref|NC_006369.1|:c2639874-2638570 Legionella pneumophila str. Lens, complete genome
ATGCCGAATTCAAGTATACAAATCTGGTTGCAAAGACAAATAGCTTTAAGAACTTTTCCTCCGAATAGAG
AGGACTGGTATGTCAAAAATGGTTTCGGTAATTCAGAGATGTCACTTGAAGAACGTTTTGCCTGTTTTGT
AGAGGCAATACGTCAAGAGGATTCTCCCTACCATGAACAATTATCAGGTATAGACTTTCATCGCTTTGAA
ATCGAGGTGACTTTAGCCAACCAAAAAACCTGTATGACCGAGGTGATAGGGTTTCAGAATAATTCCAATC
AATCAAGATCCTTACTAAATGAGAAGGTCAAAGCTGTTGGAAAGGGAAAACATGTGATTTATTTCACTGG
AATAGGAACACAATATCAAGATTGCCTGATTGATATAGCAAAAGCTGTTCAAATAACGGGAGCGCATTAT
TACGCTTTTGAATACCCGGGCATGAGAAAATTGGGTGGTGAAGTGTTAGAAGTCAATGATATGGTTAACA
CTGGAATAGTGCTGGCCAATACCTTACTTGAAAAAGGCATATCAATTGATGATATCCTTTTTCAAGGCGA
CTCCTTTGGTGCTGCGGTGGCAAAAAAAGTCAGTGATCAATTCAAACTGCAATCAAATGTAACAGTAAGA
TGCATTCTGAATAATACCTTTTCCACTTTTCAAGCTGCCGTCGAAGGAAATCTGGGTGCATTCTCTACTT
TGCGTTATACAGTTCGCCCTCTGCTTCGCTATACTGGTTGGGATATTCGCCCTGGGGATAACTATGGCCT
GGATACCCCTTACCAAATTCATATCAATCATACAGGTGATCTTACCTTAGGGGCAGGGCATGCAACGCTT
GCAGAAAGCGTTGAATCCAATTCTCAACTTGAACATTTCGTTGATCCCTGTCCTGAAGAGTATCGTATTA
AAAGAGATATCTATAAACAGTGGCATTGGGCCTCATTAAGCGAACAAGGAATAAGATTTCTCGAGACGAA
ATATGGCAGAAACAGTGACGGTCAATTGGACACGCATCTGGCCGATTTGTATTTGCTAAAGTATGATACA
GGTCTGGGGGTTTATGAATCATTTATTTGTAAATATCTCGAAGACAGTAATGACTATATCGCCAATCACC
CGCAAAAACTCTCGCTTGAGGAATTACCAATCCCTCTGGAGTCCGAAACAGTTTCATTGGGACAATTGAT
TGTCTCTGTGTTACCATCAAGGCCTAGTATAGCCGGTTTTTTTGGTCGTCCTAAACCAGTCAAGGATGAA
GTGGATTCAGAGAATCAAGCTCAGAAATCAATAGAGTTAAAGTAA

Reference
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] in_silico
 
in_silico in silico analysis literature