SecReT4
Effector Protein ID: 52842690
T4SS name [ID]Dot/Icm [5]
Gene symbol-
Locus taglpg2482
StrainLegionella pneumophila subsp. pneumophila str. Philadelphia 1
Repliconchromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon]
Location [Strand]2795479..2796825 [+]
Productprotein SdbC
Effector typeProtein
DescriptonSdbB
T4CP requirementT4CP Depedent
Target/EffectionUnknown
UniProt IDQ5ZSN5
KEGG IDlpn:lpg2482
PDB IDNA
Domain hit(s) vs Pfam Abhydrolase_5 [PF12695], Evalue: 1.8e-05, Aligned region: 111..204
Protein Sequence: 448 a.a.     [Download]
>gi|52842690|ref|YP_096489.1| protein SdbC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
MAKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDKKSHYYKEFQG
LDLSLKKVKTKLVSGESCQLEVMKCQPESNEPKKPGTGKHIVYFPGANTYYQACFRDISTACKETGATVH
AFNFPGTGLSSGKVREANDLINAGISVVSSLIKQGVHPDDIILQGDCYGASIALEVKKQLEDQADIKVRA
IMNNVFKSFKAAVCDMITQSPWLPNILKSIVKRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESST
LSGKVSKYHHEIQTGQTKSQKRAPITDTCPEEYRKDRDELDRKHYVRVKESAKERLASKFGVDKFGRVNA
HFADLCELEMLDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEVQDDLRKLHYLQPADSIEITEDEAQDFN
TVVDLITEEQQLRHDRFNDNTIGKSISM
-
Nucleotide Sequence: 1347 bp     [Download]
>gi|52840256|ref|NC_002942.5|:2795479-2796825 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome
ATGGCCAAAACTATTACAAAAGACAGTTTTTTTCATAGTCGTTTACAACAATTTGTAGCTAATTCCCTTT
TTCCAGCAGGGGCCGGTGATTGGTATAAAAACAAAGGCTACGGAAAAAAGGGCGAAGTTGATGACGAAGC
TCCTTTTAGAGATTTCGTTGAAAAACAAAAAACCGATAAAAAATCACACTATTATAAAGAGTTTCAAGGC
CTGGATTTAAGTCTGAAGAAAGTGAAAACAAAGCTGGTTTCTGGTGAATCCTGTCAGTTAGAAGTCATGA
AATGCCAACCAGAGTCAAATGAACCTAAAAAACCTGGCACTGGCAAACATATTGTCTATTTTCCCGGGGC
AAATACTTACTACCAAGCCTGTTTTCGCGATATCAGCACGGCTTGCAAAGAAACTGGAGCAACAGTACAT
GCTTTTAATTTCCCAGGGACAGGTCTCAGTTCAGGGAAGGTGAGAGAGGCAAATGACTTAATCAATGCCG
GTATTTCTGTGGTATCTTCTTTGATTAAACAAGGCGTGCACCCGGACGACATCATTTTACAGGGTGATTG
CTACGGAGCAAGCATTGCATTAGAGGTAAAAAAGCAATTAGAAGACCAGGCAGACATCAAAGTTCGTGCA
ATCATGAACAATGTTTTCAAGTCATTTAAAGCAGCCGTTTGCGATATGATTACCCAATCTCCATGGCTAC
CTAATATATTAAAAAGCATTGTTAAAAGATTGTTAGAATTTACCGGCTGGCATGTTACTCCGGGAAAAAA
ATATAAACATGCCGATCCTTACCAATGTCATATTCAACACTTGGGAGATCAAACGCTAGAATCGTCAACA
TTATCAGGTAAAGTCAGCAAATATCATCATGAAATACAAACTGGGCAAACCAAATCTCAAAAAAGGGCTC
CCATTACCGATACTTGTCCAGAAGAGTATCGAAAGGATCGCGATGAGCTGGATAGGAAACATTATGTTCG
AGTCAAAGAAAGCGCTAAAGAACGCCTTGCTTCCAAATTTGGAGTAGATAAATTTGGAAGGGTCAATGCT
CACTTTGCCGATTTGTGTGAACTGGAAATGTTGGATGGGCAATCGGTGTATCAAGGCTTTGTCAATGACT
ATATTGCCAGATCGAATGCTTATATCGAAAAACACCCTCAAAAAGGTATTAAAGAAGTTCAGGATGATTT
ACGTAAATTACATTACCTGCAACCAGCTGATTCCATAGAGATTACTGAAGATGAAGCTCAGGATTTTAAT
ACGGTAGTGGATCTTATTACGGAAGAACAACAACTAAGGCATGATCGATTCAACGATAATACAATAGGTA
AAAGCATCTCTATGTAA

Reference
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] in_silico
(2) Burstein D; Zusman T; Degtyar E; Viner R; Segal G; Pupko T (2009). Genome-scale identification of Legionella pneumophila effectors using a machine learning approach. PLoS Pathog. 5(7):e1000508. [PudMed:19593377] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature