SecReT4
Effector Protein ID: 52842179
T4SS name [ID]Dot/Icm [5]
Gene symbol-
Locus taglpg1962
StrainLegionella pneumophila subsp. pneumophila str. Philadelphia 1
Repliconchromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon]
Location [Strand]2196167..2196733 [+]
Productpeptidyl-prolyl cis-trans isomerase
Effector typeProtein
DescriptonLirB
T4CP requirementT4CP Depedent
Target/EffectionUnknown
UniProt IDQ5ZU46
KEGG IDlpn:lpg1962
PDB IDNA
Domain hit(s) vs Pfam Pro_isomerase [PF00160], Evalue: 3.8e-48, Aligned region: 26..185
Protein Sequence: 188 a.a.     [Download]
>gi|52842179|ref|YP_095978.1| peptidyl-prolyl cis-trans isomerase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
MKKIICLLSNLVLTVGIMSAHAETAIIKTSEGNITCELFTKEAPNTVANFVGLATGTKEFKDIKTGKMVK
RPFYNGLTFHRVIAGFMIQGGDPLGNGTGGPGYTFDNENTNASFNKPGVLAMANAGPNTNGSQFFITVAP
TPELQGGYNVFGQVISGQEVVDKISKMPTDPQDKPITPVVIENITIQK
-
Nucleotide Sequence: 567 bp     [Download]
>gi|52840256|ref|NC_002942.5|:2196167-2196733 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome
ATGAAAAAAATTATTTGTTTACTCAGTAACTTAGTGTTAACAGTAGGTATCATGTCAGCACATGCAGAAA
CTGCAATTATTAAAACTTCAGAGGGCAACATAACGTGTGAATTATTTACAAAAGAAGCTCCCAATACCGT
TGCAAATTTTGTAGGGCTGGCAACTGGAACAAAAGAATTTAAAGACATAAAAACTGGCAAAATGGTTAAA
CGCCCTTTTTACAATGGCTTAACCTTTCATCGTGTGATTGCCGGCTTTATGATTCAGGGCGGCGACCCCC
TCGGAAATGGGACCGGTGGCCCAGGTTACACATTTGATAATGAAAATACTAATGCCAGTTTTAACAAACC
TGGCGTACTTGCCATGGCCAATGCTGGACCAAACACGAATGGCAGTCAATTTTTTATTACCGTTGCACCA
ACACCTGAATTACAAGGTGGCTACAATGTTTTTGGTCAAGTCATTTCTGGACAAGAAGTTGTTGATAAGA
TTAGCAAGATGCCCACTGATCCACAAGATAAACCCATTACACCTGTAGTCATTGAAAATATTACCATTCA
AAAGTAA

Reference
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] in_silico
(2) Burstein D; Zusman T; Degtyar E; Viner R; Segal G; Pupko T (2009). Genome-scale identification of Legionella pneumophila effectors using a machine learning approach. PLoS Pathog. 5(7):e1000508. [PudMed:19593377] experimental in_silico
(3) Zusman T; Degtyar E; Segal G (2008). Identification of a hypervariable region containing new Legionella pneumophila Icm/Dot translocated substrates by using the conserved icmQ regulatory signature. Infect Immun. 76(10):4581-91. [PudMed:18694969] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature