SecReT4
Effector Protein ID: 52841726
T4SS name [ID]Dot/Icm [5]
Gene symbol-
Locus taglpg1496
StrainLegionella pneumophila subsp. pneumophila str. Philadelphia 1
Repliconchromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon]
Location [Strand]1652066..1653862 [+]
Producthypothetical protein
Effector typeProtein
DescriptonLem10
T4CP requirementT4CP Depedent
Target/EffectionUnknown
UniProt IDQ5ZVE4
KEGG IDlpn:lpg1496
PDB IDNA
Domain hit(s) vs Pfam SidE [PF12252], Evalue: 2.2e-12, Aligned region: 307..513
Protein Sequence: 598 a.a.     [Download]
>gi|52841726|ref|YP_095525.1| hypothetical protein lpg1496 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
MVTKIIWVSNNGKPNLKIEFVSEEEKSNFFKEVKKKASELGLNFPLVQGSGNSLLIEASNYPINPCGCYI
SPGGKLAINFGKVELSHFILPKVGVKTEHAEIFKDHNTIFFHKHKLPGVNSELTFIPTGTPVIVPVTKPA
TTSPAFFNPSKSGDSSISISAIGNVDSPMIRITFQNQTEREFFLNKITDKAKSLGVNISTHPFEIKEPNM
VLIKPSKYPDNKLGCYISKNKEIAINFGRTDFRDFVLSNLGVGSHLGTCPTKNETGNDTFYFHQENLSLN
GPALSVNTKITKEIEKNDYLLSANGSKAIDFVWSNFLKHPYNPKLKQPDANVKAAWEKHADWEHWSNMGQ
DWSLNTPSGLVPRPNHGIAHTLRVAQLVPVIAEFLKAYSGDPKFQKLTQKEIQKAQYMMLFSVIGRENDM
SWTDANHYQQAFKEAYNGQYSKHIYATFKENAQKGFLNHVVTNKSSLIPSLFSDESELQYWAEALDTGKP
GISSASGILMALAHDLDLMRCYDKGKFNSLKMKDLVARLGGNEDAAKKLADYAHDLIVATGDRCMGYGVT
QDYNYSLFGKCSLDPNECLKQLQSIPKPETTLANQYGI
-
Nucleotide Sequence: 1797 bp     [Download]
>gi|52840256|ref|NC_002942.5|:1652066-1653862 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome
ATGGTTACGAAAATAATTTGGGTTTCTAATAATGGTAAACCTAATTTAAAAATTGAATTTGTTAGTGAGG
AAGAAAAAAGTAATTTTTTCAAGGAGGTAAAGAAAAAAGCAAGCGAATTAGGACTAAATTTTCCATTAGT
GCAAGGCTCTGGAAATTCTCTTCTGATAGAAGCTTCAAATTACCCAATTAATCCTTGTGGTTGTTATATA
TCCCCAGGTGGGAAATTAGCTATTAATTTTGGAAAAGTGGAGTTGAGTCATTTTATATTACCTAAAGTAG
GCGTGAAAACAGAACATGCCGAGATTTTCAAGGACCACAATACTATTTTCTTCCATAAACATAAACTTCC
AGGTGTGAATTCTGAATTAACGTTCATACCGACTGGCACACCTGTTATTGTTCCCGTAACAAAACCGGCG
ACTACTTCTCCAGCATTTTTTAATCCTTCAAAGTCAGGGGATTCTTCGATTTCTATTAGTGCGATAGGAA
ACGTTGATAGTCCGATGATAAGAATTACTTTTCAAAATCAAACGGAGCGAGAGTTTTTTCTAAATAAAAT
AACAGATAAAGCAAAAAGTTTAGGAGTCAATATCTCAACTCATCCTTTTGAAATCAAAGAACCTAATATG
GTACTTATTAAACCTTCTAAATACCCGGACAATAAATTAGGTTGCTATATTTCAAAGAATAAGGAAATTG
CAATTAATTTTGGAAGGACAGATTTTAGAGACTTTGTGTTGTCTAATCTCGGAGTAGGCTCTCATTTAGG
GACCTGCCCAACAAAAAATGAAACAGGTAACGACACTTTCTATTTTCATCAGGAGAATCTTTCTTTAAAT
GGCCCTGCATTATCAGTAAATACCAAAATAACCAAAGAAATAGAGAAAAATGATTATCTACTATCTGCTA
ATGGCTCCAAGGCCATTGATTTTGTTTGGAGTAATTTTTTAAAACATCCTTATAATCCTAAACTGAAGCA
GCCAGATGCTAATGTAAAAGCAGCTTGGGAAAAGCATGCTGATTGGGAACATTGGTCCAATATGGGACAG
GATTGGTCATTAAATACTCCCTCGGGTTTAGTTCCCAGGCCAAATCATGGAATTGCTCATACGTTACGAG
TCGCACAGCTTGTACCAGTCATTGCTGAATTTTTGAAAGCATATTCAGGTGATCCAAAATTCCAAAAATT
AACGCAAAAAGAAATACAAAAAGCACAATACATGATGTTATTTTCAGTAATTGGGCGTGAAAACGATATG
AGTTGGACAGATGCCAATCATTACCAGCAGGCATTTAAGGAAGCATACAATGGACAGTATTCCAAGCACA
TCTATGCTACTTTCAAAGAAAATGCTCAAAAAGGTTTTTTAAATCATGTGGTTACCAATAAATCGTCATT
AATTCCTTCACTATTTTCCGATGAAAGCGAGCTTCAATATTGGGCTGAAGCTTTGGACACCGGTAAGCCC
GGAATTTCTTCTGCCTCGGGCATACTTATGGCTCTGGCTCATGATTTGGACCTCATGAGATGCTATGACA
AAGGAAAATTTAATAGTCTGAAGATGAAGGATTTAGTTGCAAGGCTTGGAGGAAATGAAGATGCAGCAAA
GAAACTGGCTGATTATGCTCATGATCTGATTGTAGCGACTGGGGATCGATGCATGGGTTATGGGGTAACT
CAGGATTATAATTACTCTCTTTTTGGCAAATGCAGCCTTGATCCCAATGAGTGTCTAAAGCAGCTTCAAA
GTATTCCTAAACCAGAGACAACCTTGGCAAATCAATATGGTATTTGA

Reference
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] in_silico
(2) Burstein D; Zusman T; Degtyar E; Viner R; Segal G; Pupko T (2009). Genome-scale identification of Legionella pneumophila effectors using a machine learning approach. PLoS Pathog. 5(7):e1000508. [PudMed:19593377] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature