Effector Protein ID: 52841726 |
T4SS name [ID] | Dot/Icm [5] |
Gene symbol | - |
Locus tag | lpg1496 |
Strain | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 |
Replicon | chromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon] |
Location [Strand] | 1652066..1653862 [+] |
Product | hypothetical protein |
Effector type | Protein |
Descripton | Lem10 |
T4CP requirement | T4CP Depedent |
Target/Effection | Unknown |
UniProt ID | Q5ZVE4 |
KEGG ID | lpn:lpg1496 |
PDB ID | NA |
Domain hit(s) vs Pfam | SidE [PF12252], Evalue: 2.2e-12, Aligned region: 307..513 |
Protein Sequence: 598 a.a. [Download] |
>gi|52841726|ref|YP_095525.1| hypothetical protein lpg1496 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] MVTKIIWVSNNGKPNLKIEFVSEEEKSNFFKEVKKKASELGLNFPLVQGSGNSLLIEASNYPINPCGCYI SPGGKLAINFGKVELSHFILPKVGVKTEHAEIFKDHNTIFFHKHKLPGVNSELTFIPTGTPVIVPVTKPA TTSPAFFNPSKSGDSSISISAIGNVDSPMIRITFQNQTEREFFLNKITDKAKSLGVNISTHPFEIKEPNM VLIKPSKYPDNKLGCYISKNKEIAINFGRTDFRDFVLSNLGVGSHLGTCPTKNETGNDTFYFHQENLSLN GPALSVNTKITKEIEKNDYLLSANGSKAIDFVWSNFLKHPYNPKLKQPDANVKAAWEKHADWEHWSNMGQ DWSLNTPSGLVPRPNHGIAHTLRVAQLVPVIAEFLKAYSGDPKFQKLTQKEIQKAQYMMLFSVIGRENDM SWTDANHYQQAFKEAYNGQYSKHIYATFKENAQKGFLNHVVTNKSSLIPSLFSDESELQYWAEALDTGKP GISSASGILMALAHDLDLMRCYDKGKFNSLKMKDLVARLGGNEDAAKKLADYAHDLIVATGDRCMGYGVT QDYNYSLFGKCSLDPNECLKQLQSIPKPETTLANQYGI |
- |
Nucleotide Sequence: 1797 bp [Download] |
>gi|52840256|ref|NC_002942.5|:1652066-1653862 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome ATGGTTACGAAAATAATTTGGGTTTCTAATAATGGTAAACCTAATTTAAAAATTGAATTTGTTAGTGAGG AAGAAAAAAGTAATTTTTTCAAGGAGGTAAAGAAAAAAGCAAGCGAATTAGGACTAAATTTTCCATTAGT GCAAGGCTCTGGAAATTCTCTTCTGATAGAAGCTTCAAATTACCCAATTAATCCTTGTGGTTGTTATATA TCCCCAGGTGGGAAATTAGCTATTAATTTTGGAAAAGTGGAGTTGAGTCATTTTATATTACCTAAAGTAG GCGTGAAAACAGAACATGCCGAGATTTTCAAGGACCACAATACTATTTTCTTCCATAAACATAAACTTCC AGGTGTGAATTCTGAATTAACGTTCATACCGACTGGCACACCTGTTATTGTTCCCGTAACAAAACCGGCG ACTACTTCTCCAGCATTTTTTAATCCTTCAAAGTCAGGGGATTCTTCGATTTCTATTAGTGCGATAGGAA ACGTTGATAGTCCGATGATAAGAATTACTTTTCAAAATCAAACGGAGCGAGAGTTTTTTCTAAATAAAAT AACAGATAAAGCAAAAAGTTTAGGAGTCAATATCTCAACTCATCCTTTTGAAATCAAAGAACCTAATATG GTACTTATTAAACCTTCTAAATACCCGGACAATAAATTAGGTTGCTATATTTCAAAGAATAAGGAAATTG CAATTAATTTTGGAAGGACAGATTTTAGAGACTTTGTGTTGTCTAATCTCGGAGTAGGCTCTCATTTAGG GACCTGCCCAACAAAAAATGAAACAGGTAACGACACTTTCTATTTTCATCAGGAGAATCTTTCTTTAAAT GGCCCTGCATTATCAGTAAATACCAAAATAACCAAAGAAATAGAGAAAAATGATTATCTACTATCTGCTA ATGGCTCCAAGGCCATTGATTTTGTTTGGAGTAATTTTTTAAAACATCCTTATAATCCTAAACTGAAGCA GCCAGATGCTAATGTAAAAGCAGCTTGGGAAAAGCATGCTGATTGGGAACATTGGTCCAATATGGGACAG GATTGGTCATTAAATACTCCCTCGGGTTTAGTTCCCAGGCCAAATCATGGAATTGCTCATACGTTACGAG TCGCACAGCTTGTACCAGTCATTGCTGAATTTTTGAAAGCATATTCAGGTGATCCAAAATTCCAAAAATT AACGCAAAAAGAAATACAAAAAGCACAATACATGATGTTATTTTCAGTAATTGGGCGTGAAAACGATATG AGTTGGACAGATGCCAATCATTACCAGCAGGCATTTAAGGAAGCATACAATGGACAGTATTCCAAGCACA TCTATGCTACTTTCAAAGAAAATGCTCAAAAAGGTTTTTTAAATCATGTGGTTACCAATAAATCGTCATT AATTCCTTCACTATTTTCCGATGAAAGCGAGCTTCAATATTGGGCTGAAGCTTTGGACACCGGTAAGCCC GGAATTTCTTCTGCCTCGGGCATACTTATGGCTCTGGCTCATGATTTGGACCTCATGAGATGCTATGACA AAGGAAAATTTAATAGTCTGAAGATGAAGGATTTAGTTGCAAGGCTTGGAGGAAATGAAGATGCAGCAAA GAAACTGGCTGATTATGCTCATGATCTGATTGTAGCGACTGGGGATCGATGCATGGGTTATGGGGTAACT CAGGATTATAATTACTCTCTTTTTGGCAAATGCAGCCTTGATCCCAATGAGTGTCTAAAGCAGCTTCAAA GTATTCCTAAACCAGAGACAACCTTGGCAAATCAATATGGTATTTGA |
Reference |
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] |
(2) Burstein D; Zusman T; Degtyar E; Viner R; Segal G; Pupko T (2009). Genome-scale identification of Legionella pneumophila effectors using a machine learning approach. PLoS Pathog. 5(7):e1000508. [PudMed:19593377] |
experimental literature |
in silico analysis literature |