SecReT4
Effector Protein ID: 52840879
T4SS name [ID]Dot/Icm [5]
Gene symbol-
Locus taglpg0642
StrainLegionella pneumophila subsp. pneumophila str. Philadelphia 1
Repliconchromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon]
Location [Strand]680594..682168 [+]
Producthypothetical protein
Effector typeProtein
DescriptonWipB
T4CP requirementT4CP Depedent
Target/EffectionUnknown
UniProt IDQ5ZXT9
KEGG IDlpn:lpg0642
PDB IDNA
Domain hit(s) vs Pfam NA
Protein Sequence: 524 a.a.     [Download]
>gi|52840879|ref|YP_094678.1| hypothetical protein lpg0642 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
MKTQRIIHPNIDIRKFPEVNTDFSMTDISMGDLHANALLFLNILVRQGIIAISPENYAKFAEIYTLPELQ
ADYWGTEAPVFSAENKQERLEEIKKQYNALIAQIKIINTKKLIRLIGDELVDRGVIDYFILKLLQALYDQ
GADFEILLSNHGIEFVEACELFKENGNKLVAKRLGNIQHGNSFHALQEAIAAGAISNEEVLNIYHQVYKK
HLKIISYSLDPDANEIKVFSHAGIGLNHIRGLARKFKVPYSEESAVDLAKTIDAINKKFAEKASSGEIHT
LYTHDMMYRGYAGEHLNSTDEVVAATVWGREYGDLIRTSKKFKITFIHGHDSYDPEKVEHVTLNNQLGQF
QNNVGDLYLYATNGMRAVPTQYLNPDKKIQGSREKDRPDKPNDYVVKIHHTKPSFFKTSNPKITFPDSYK
RIWDSADGDSNITKIKALLKDYTKEDSILGSFWGLIFTLHWGRHHVKSVHQIAQTKYTSVEAILSDLKAL
KPREGGSLDKRIKFIELQIIAQRCDSPEPQFNLK
-
Nucleotide Sequence: 1575 bp     [Download]
>gi|52840256|ref|NC_002942.5|:680594-682168 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome
ATGAAAACTCAGCGAATTATCCATCCCAATATTGATATTAGAAAGTTTCCTGAAGTAAATACAGATTTTT
CCATGACCGATATTAGCATGGGAGATTTGCATGCTAATGCCTTGCTTTTTCTCAATATCCTTGTTCGCCA
GGGAATAATTGCTATTTCTCCCGAAAATTATGCCAAATTTGCTGAAATTTATACTTTGCCAGAGCTTCAG
GCAGATTACTGGGGGACCGAAGCACCTGTTTTTAGCGCTGAAAATAAACAGGAGCGTTTGGAAGAAATCA
AGAAACAATACAATGCATTAATAGCGCAAATCAAAATTATTAATACTAAAAAATTGATTCGCTTGATAGG
CGATGAATTAGTAGATCGCGGTGTTATTGATTATTTCATTTTAAAATTATTACAAGCTTTGTACGATCAA
GGTGCTGATTTTGAAATATTACTTTCAAATCATGGGATTGAGTTTGTCGAGGCCTGTGAACTATTCAAGG
AAAATGGAAACAAATTAGTAGCAAAAAGATTAGGAAATATTCAGCATGGTAATTCATTTCATGCATTGCA
AGAAGCAATAGCAGCTGGTGCGATTTCAAATGAAGAAGTATTAAATATTTACCATCAAGTTTACAAAAAG
CACTTGAAAATTATTTCTTACTCATTGGATCCAGATGCAAATGAAATTAAAGTGTTTAGTCATGCTGGTA
TTGGTTTAAATCATATTCGAGGGCTTGCCAGAAAATTTAAAGTACCCTATTCAGAAGAGTCGGCTGTTGA
TTTGGCTAAAACAATTGATGCAATTAACAAAAAATTCGCAGAAAAAGCATCTTCGGGAGAGATTCACACG
CTTTATACCCATGATATGATGTATAGAGGTTATGCAGGCGAACATTTGAATTCAACAGACGAAGTGGTTG
CCGCAACGGTCTGGGGACGTGAATATGGGGATTTGATTCGAACGTCTAAAAAATTTAAAATCACCTTTAT
TCATGGCCATGATAGTTACGACCCTGAAAAGGTAGAACATGTCACTTTAAATAATCAATTAGGGCAATTT
CAAAATAATGTAGGTGATTTATATCTGTATGCCACCAATGGCATGAGAGCGGTTCCAACACAATATTTGA
ATCCAGATAAAAAAATTCAGGGCTCAAGGGAAAAAGATCGACCAGATAAACCGAATGATTATGTTGTAAA
AATCCATCATACTAAACCATCATTTTTTAAAACTTCTAATCCCAAGATCACATTCCCGGACAGCTATAAA
CGAATTTGGGACAGTGCGGATGGGGATTCCAATATCACCAAAATTAAGGCATTACTTAAAGATTACACCA
AGGAAGACAGTATTTTGGGTTCGTTTTGGGGCTTAATATTTACATTACATTGGGGAAGACATCACGTCAA
ATCTGTGCATCAGATTGCCCAAACTAAATATACATCAGTAGAGGCTATTCTTTCGGATTTGAAAGCACTT
AAGCCAAGGGAAGGTGGCTCATTAGATAAACGCATTAAGTTTATTGAATTACAAATTATAGCTCAGAGGT
GTGATTCTCCAGAACCACAATTCAACTTGAAATAG

Reference
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] in_silico
(2) Burstein D; Zusman T; Degtyar E; Viner R; Segal G; Pupko T (2009). Genome-scale identification of Legionella pneumophila effectors using a machine learning approach. PLoS Pathog. 5(7):e1000508. [PudMed:19593377] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature