Effector Protein ID: 52840425 |
T4SS name [ID] | Dot/Icm [5] |
Gene symbol | - |
Locus tag | lpg0170 |
Strain | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 |
Replicon | chromosome [GenBank: NC_002942] [Browse all T4SS(s) in this replicon] |
Location [Strand] | 199432..200187 [-] |
Product | ABC transporter permease |
Effector type | Protein |
Descripton | RavC |
T4CP requirement | T4CP Depedent |
Target/Effection | Unknown |
UniProt ID | Q5ZZ41 |
KEGG ID | lpn:lpg0170 |
PDB ID | NA |
Domain hit(s) vs Pfam | Permease [PF02405], Evalue: 1.1e-11, Aligned region: 47..116 Permease [PF02405], Evalue: 1.1e-11, Aligned region: 139..250 |
Protein Sequence: 251 a.a. [Download] |
>gi|52840425|ref|YP_094224.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] MYVFRRFSKPIITFLHSLELAFRFLGHLVHSTIKVIFGKLSIVWPNTLEMIYYSGARLVILLSFIGILLG ATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMVNTRLEHYQENPEAIILAQVL PIIVGMNIASLLLYVYLVSAIFFSFYLTFHFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLT SGYYYYEASIRHIYLRKAVSRILTRGSFWLIIASMYITLTF |
- |
Nucleotide Sequence: 756 bp [Download] |
>gi|52840256|ref|NC_002942.5|:c200187-199432 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome ATGTATGTTTTTCGCCGTTTTTCGAAGCCTATTATTACTTTTCTCCATTCGCTTGAGCTCGCTTTTCGAT TTTTAGGCCATTTGGTTCATAGCACTATCAAAGTTATTTTTGGCAAACTGTCCATCGTCTGGCCTAACAC ACTAGAAATGATTTACTATTCTGGAGCGCGGCTTGTTATTCTACTGAGTTTTATTGGTATATTATTAGGC GCTACTGTTTCACAAACGGTTTATGCGCTCTTAAAACCTTTTCAGCTACATCAACGAGTACTTCCCATTG TGCAAAATATTTTAACCCATGAAATATTACCGGTACTTATTGGCTTCATTTTATGTATCCAAGCCGCCTT GCATATGGTTAACACCCGTTTGGAGCATTACCAGGAGAATCCAGAGGCAATTATCCTTGCTCAAGTATTA CCAATCATTGTAGGTATGAACATTGCCTCCTTACTGCTATACGTTTATCTTGTATCCGCTATCTTTTTTA GTTTTTATCTCACTTTTCATTTTATGTTAGGGTTTACAAACAATGAATTTTTATCCTATGTTGTCAGCTC GACAACCTTATTTGATCTGATATACTCGGTCGTTAAGACATTGATTTTATGCATCATAGTTGGGTTGACT TCTGGTTATTATTATTATGAAGCATCTATTAGACATATTTATTTGAGAAAAGCAGTTTCTCGAATTTTAA CGCGTGGCTCATTCTGGCTGATCATTGCCAGTATGTATATTACTCTTACGTTTTAG |
Reference |
(1) Gomez-Valero L et al. (2014). Comparative analyses of Legionella species identifies genetic features of strains causing Legionnaires' disease. Genome Biol. 15(11):505. [PudMed:25370836] |
(2) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] |
experimental literature |
in silico analysis literature |