| Effector Protein ID: 222080231 |
 T4SS name [ID] | VirB [14] |
| Gene symbol | virD5 |
| Locus tag | Avi_8208 |
| Strain | Agrobacterium vitis S4 |
| Replicon | plasmid pTiS4 [GenBank: NC_011982] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 148205..150673 [-] |
| Product | virA/G regulated protein |
| Effector type | Protein |
| Descripton | VirD5 |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirD5 interacts with and stabilizes VirF in plants. |
| UniProt ID | B9K400 |
| KEGG ID | avi:Avi_8208 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Agro_virD5 [PF04730], Evalue: 0, Aligned region: 63..819 |
| Protein Sequence: 822 a.a. [Download] |
| >gi|222080231|ref|YP_002540094.1| virA/G regulated protein [Agrobacterium vitis S4] MKTSGSSQSGYGESARSSAEVNTGITPVLHPKVPSNRFAGSTSDGQTDHWENSCSPFFYDGMRLGAAERS AYETWDRADRPGWKDPIINARMSAIDSSDWNLDFRESTSSTFVYEGVPLVEGERRAYEEWMEPGQPSWEQ LVVNARIEQLHAASSIPNECDFVQQEFRSDASKRRRTSSIDQKIGFPHAFEFDGMRLGSPEREVYENWSK LQAPSWKDLIIDARLEAIDSSGWLNESNNSSVFEYEGLPLGEGERLAYEKWLGPAQPGWEDLVVDARIAE LDRVASMSCSHERGKETPSNECERVPRVPIDDDEVSCASFVYDGVAERAAHNRGSKPYQPTWEDLIIDAR QAVIEGDAESNPVIGTTPSSVFSYEGMSLGDAERRAYGHWKQPAQPRWQNLVVNARLAELDPAAWIPDEH DPFEDGKVTGLLSEASTNSKSRLSLVEQLEARPLCLTRDAAQEQTNVQNLACTQLEARRVLNFGPSGSDT DQTGSIAKSSPLDDVTKVKRLGSRSRRGARAAANDEIFHTKGSPSHGTGLTPQSTQPEKAASTRSDNIGT YGSRKNERARLATETGKYESEHIFGFKVVHHTLRSTKEGRRLERPMPAYLECKELHRQHVGTGRGRTGLV GRGWPDDASYRSDQRATLSDPVASTESVTASNGYQLNQLGYAHQLANDGLQCETPDGVIMPLQVATTSYN YTVSRDPVLSSPCKDQTSELLHLGPRGQTEAVLARETALTGKWPTREREQKVYREFLALYDVKKDLETMP LGLRKKKALLVSALNRTAASIGASKAENAFDEFYERRIYDPRDRARDNISAR |
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| Nucleotide Sequence: 2469 bp [Download] |
| >gi|222080117|ref|NC_011982.1|:c150673-148205 Agrobacterium vitis S4 plasmid pTiS4, complete sequence ATGAAAACATCGGGAAGCTCGCAAAGCGGATACGGTGAGTCGGCTAGATCCTCGGCAGAGGTTAACACCG GGATTACGCCTGTCCTACATCCCAAAGTGCCTTCGAACCGTTTCGCTGGATCCACATCCGACGGCCAAAC GGATCATTGGGAAAATTCGTGTTCGCCATTCTTTTATGACGGAATGAGACTTGGCGCCGCCGAGCGGTCC GCGTACGAGACATGGGACAGAGCGGACAGGCCGGGTTGGAAAGATCCGATAATAAACGCTCGCATGAGCG CGATAGACAGTTCCGATTGGAATCTCGATTTCAGAGAAAGTACCTCATCGACGTTTGTTTATGAGGGTGT GCCCCTGGTGGAAGGGGAACGGCGCGCCTACGAAGAATGGATGGAGCCGGGACAACCCAGTTGGGAACAA CTCGTTGTAAACGCGCGTATTGAACAGCTACACGCCGCTTCTTCGATTCCGAACGAGTGTGATTTCGTTC AGCAGGAATTCCGGTCCGATGCCTCCAAGCGCAGGCGGACAAGCTCGATCGATCAAAAAATCGGTTTCCC TCACGCATTCGAATTTGATGGGATGAGACTCGGCTCACCTGAGCGCGAGGTATATGAGAATTGGAGTAAA TTACAGGCACCATCCTGGAAAGACCTAATAATCGACGCGCGTCTTGAAGCGATCGACAGCTCTGGCTGGC TCAACGAATCAAATAACAGCTCGGTCTTCGAGTACGAAGGCCTCCCACTTGGGGAGGGTGAACGGCTAGC ATACGAAAAATGGCTCGGGCCCGCGCAGCCAGGATGGGAAGATCTCGTTGTTGACGCACGCATTGCTGAA TTGGACCGGGTTGCTTCGATGTCGTGCTCACATGAAAGAGGCAAGGAAACTCCTTCCAACGAATGCGAGC GCGTGCCCCGCGTCCCAATTGATGACGATGAGGTGTCGTGTGCGTCCTTTGTGTACGATGGAGTGGCGGA GCGCGCTGCGCATAATCGCGGGAGCAAGCCGTACCAGCCCACCTGGGAAGATCTTATCATAGACGCACGC CAAGCTGTAATCGAAGGTGACGCCGAATCGAATCCGGTGATCGGGACGACACCTTCCTCAGTCTTCTCAT ATGAGGGAATGTCGCTTGGCGATGCGGAACGTCGGGCGTACGGACATTGGAAGCAGCCAGCCCAGCCGCG TTGGCAAAATCTGGTCGTGAACGCGCGCCTGGCAGAGCTCGACCCCGCGGCCTGGATTCCCGATGAACAT GATCCGTTTGAGGATGGCAAGGTGACTGGTCTTCTGTCGGAAGCAAGTACGAACAGTAAGTCCCGTCTCA GTTTGGTTGAACAACTTGAAGCACGCCCACTTTGTCTCACACGGGATGCAGCACAAGAGCAGACTAACGT GCAAAATCTCGCATGCACGCAATTGGAAGCAAGACGCGTACTCAATTTCGGGCCCTCTGGAAGTGACACA GATCAAACCGGAAGCATCGCCAAAAGTAGTCCCCTGGACGACGTCACCAAAGTTAAACGGCTGGGCAGTA GGAGCCGTCGAGGCGCCAGAGCAGCGGCCAATGACGAAATTTTCCACACGAAAGGGTCGCCGTCCCACGG GACGGGGTTGACGCCCCAGTCCACTCAGCCAGAAAAAGCCGCTAGCACGAGAAGCGACAATATTGGCACT TATGGAAGTCGTAAAAACGAACGAGCGCGGCTTGCGACCGAGACCGGAAAATACGAGTCGGAGCATATTT TTGGGTTCAAGGTTGTCCACCATACCCTGCGCTCGACAAAAGAGGGCCGGCGTTTGGAGAGGCCGATGCC CGCTTACCTCGAATGCAAGGAGCTTCATCGCCAACATGTTGGTACCGGAAGGGGGCGGACCGGACTGGTG GGGCGCGGGTGGCCAGATGACGCGAGCTACCGGTCTGATCAAAGGGCAACCCTGTCTGACCCTGTTGCGT CCACGGAAAGTGTAACGGCTTCAAATGGGTATCAATTAAACCAGCTTGGCTACGCGCACCAACTCGCTAA CGACGGGTTGCAATGTGAAACGCCAGATGGGGTGATCATGCCACTTCAGGTTGCGACTACCAGCTACAAC TATACAGTAAGCCGCGATCCGGTCCTTTCCTCACCTTGTAAAGATCAGACTTCTGAATTGCTGCATCTTG GGCCCCGTGGCCAGACAGAAGCTGTACTCGCCCGCGAAACGGCATTGACAGGAAAATGGCCTACTCGCGA GCGTGAGCAGAAAGTATATCGAGAGTTTTTAGCCCTTTATGACGTTAAGAAGGACCTAGAGACCATGCCA CTTGGATTGAGGAAGAAAAAAGCTTTGCTTGTTTCCGCGTTGAACCGTACCGCGGCCTCGATAGGCGCAT CAAAAGCTGAAAATGCTTTTGACGAGTTTTATGAACGACGGATTTATGATCCGCGCGATCGGGCACGAGA TAATATCAGTGCCCGATGA |