| Effector Protein ID: 190404485 |
 T4SS name [ID] | VirB [16] |
| Gene symbol | - |
| Locus tag | pRi2659_p142 |
| Strain | Agrobacterium rhizogenes plasmid pRi2659 (NC_010841) |
| Replicon | plasmid pRi2659 [GenBank: NC_010841] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 177650..180157 [+] |
| Product | rcorf141 |
| Effector type | Protein |
| Descripton | VirD5 |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirD5 interacts with and stabilizes VirF in plants. |
| UniProt ID | A8W0J6 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Agro_virD5 [PF04730], Evalue: 0, Aligned region: 63..835 |
| Protein Sequence: 835 a.a. [Download] |
| >gi|190404485|ref|YP_001961116.1| rcorf141 [Agrobacterium rhizogenes] MKPSGSSKTGYAGSARSSPQVRAGVTPVLHPKEPWNRFACSPSDGQMDHRENLSAQFAYDGMRLGAAERS AYETWDRADRPSWKDLILSARLNAIDSFAWNVDVGESTSSTFVYDGVPLAEGERHAYEEWVEPGQPSWQQ LVVNARIEELNTSAAIPNECSPLQEEFRSEAPKRKRTSSIGQKNGFPEPFEFDGMRLGSPEREAYENWSK PQPPSWKDLIVDARLDAIDTSTWLNESNDTSVFEYEGVPLGEGERLAYEKWLKPAQPGWEDLVVDARVAE LHQSAPTWCEHQPGNDVSSNESGRISGVPINAEQVSRAFFVYDGVALGAAERAAHDRWSRPDRPTWEDLI IVARQAAIEGGAVSNGMIGKTSSSVFLYEGMLLGDAERQAYGRWRQLAQPRWQNLVVNARLAELDPAAWI PDEHDPSEDGGATGLLSQASTTNKSRLSLGDQPEARSPSLAREPAQQPTHVQNLTCAQLEARRALYFGPS GRDADQTASIADSNRLDEVSKVKRLGAKSRRGAKATAYDVISSAERLSSHEGCLTVQSTQPEKAACSRSD NIGTYGSRKNERARLATETGKYESEHIFGFKVVHDTLRSTKEGRRLERPMPAYLECKELHRQHVGTGRGR TRLVGRGWPDDASYRSDQRATLSDPVASTEGATASNGYQLNQLGYAHQLANDGLQSETPDGVIMPLQVAT TSYNYTVSRDPVLSPPSKEQAPELLHLGPRGQTEAVLARETALTGRWPTREREQQVYREFLALYDVKKDL EAKTLGLRKKKAALVSALNRTAASIGTSPLKAQSSSAEVEKATHEFDERRVYDPRDRGRDKALQR |
| - |
| Nucleotide Sequence: 2508 bp [Download] |
| >gi|190404344|ref|NC_010841.1|:177650-180157 Agrobacterium rhizogenes plasmid pRi2659, complete sequence ATGAAACCGTCGGGAAGCTCAAAAACTGGATACGCCGGGTCGGCTAGATCCTCGCCCCAGGTTCGCGCAG GGGTTACGCCTGTCCTTCATCCCAAAGAGCCTTGGAACCGTTTTGCTTGCTCCCCATCTGACGGCCAAAT GGATCACCGGGAAAATTTATCTGCGCAATTCGCTTACGATGGAATGAGACTGGGCGCAGCCGAGCGGTCC GCGTACGAGACATGGGATAGAGCGGACCGGCCGAGTTGGAAAGACCTGATACTGAGCGCTCGCCTGAACG CGATTGACAGTTTCGCTTGGAATGTCGATGTCGGAGAAAGTACCTCTTCAACTTTTGTTTATGATGGTGT TCCTCTGGCGGAAGGGGAACGGCATGCCTACGAGGAATGGGTGGAGCCGGGACAGCCCAGTTGGCAACAA CTCGTTGTGAACGCGCGTATTGAAGAGCTAAACACCTCTGCTGCAATTCCGAATGAGTGTAGTCCCCTTC AAGAGGAATTCCGATCGGAGGCGCCTAAGCGTAAGCGGACAAGCTCCATTGGTCAAAAGAACGGTTTCCC TGAACCATTCGAATTTGATGGGATGAGACTCGGCTCGCCTGAGCGCGAAGCATATGAGAATTGGAGTAAA CCGCAACCGCCATCCTGGAAAGACCTGATAGTTGACGCCCGTCTTGACGCAATCGACACCTCCACCTGGC TCAACGAATCAAATGACACCTCGGTCTTCGAGTACGAAGGCGTCCCGCTTGGGGAGGGGGAACGCCTAGC ATATGAAAAATGGCTCAAGCCCGCGCAACCAGGATGGGAAGACCTGGTTGTGGACGCACGCGTTGCGGAA TTGCACCAGTCTGCTCCGACGTGGTGCGAACACCAACCAGGCAACGACGTTTCTTCCAACGAGTCCGGGC GCATCTCGGGCGTCCCAATTAACGCCGAGCAGGTGTCGCGTGCGTTCTTCGTGTACGATGGAGTGGCGCT CGGAGCAGCCGAGCGCGCTGCGCATGATCGTTGGAGCAGGCCGGACCGGCCCACCTGGGAAGATCTTATC ATAGTCGCGCGCCAAGCTGCTATCGAAGGCGGTGCCGTTTCGAATGGGATGATCGGGAAGACATCTTCCT CAGTCTTTTTATACGAGGGAATGTTGCTTGGGGATGCGGAGCGTCAGGCGTACGGACGGTGGAGGCAGCT AGCCCAGCCGCGGTGGCAAAATCTGGTGGTGAACGCGCGCCTGGCAGAGCTCGACCCGGCGGCCTGGATT CCCGATGAACATGATCCGTCTGAGGATGGCGGGGCGACTGGTCTTCTGTCGCAAGCAAGCACGACCAATA AGTCCCGCCTCAGTTTAGGTGATCAACCGGAAGCGCGCTCGCCTAGTCTCGCACGTGAGCCAGCACAACA GCCGACTCACGTGCAAAACCTGACGTGCGCACAATTGGAAGCAAGACGTGCTCTATATTTCGGGCCCTCT GGGAGGGATGCAGACCAAACCGCCAGCATCGCCGACAGTAATCGCCTCGACGAGGTAAGCAAAGTTAAAC GGCTGGGTGCCAAGAGCCGTCGAGGCGCTAAAGCAACGGCCTATGACGTAATTTCAAGTGCGGAAAGACT GTCGTCTCACGAGGGTTGTTTGACGGTTCAGTCCACTCAGCCAGAAAAAGCCGCTTGCTCGAGAAGCGAC AATATCGGCACTTATGGAAGTCGAAAAAACGAACGAGCTCGGCTTGCGACCGAGACCGGGAAATACGAGT CGGAGCATATTTTCGGGTTCAAGGTTGTCCACGATACCCTGCGCTCGACCAAAGAGGGCCGGCGGCTGGA AAGGCCTATGCCCGCCTATCTCGAATGCAAGGAACTTCATCGACAACATGTTGGTACGGGAAGGGGGCGG ACCCGACTGGTGGGGCGCGGCTGGCCAGATGACGCAAGTTACCGCTCGGATCAAAGGGCAACTCTATCGG ACCCTGTTGCGTCCACGGAAGGTGCAACGGCGTCAAACGGGTATCAATTAAACCAGCTAGGCTACGCACA CCAGCTCGCTAACGACGGGCTGCAGAGCGAAACGCCAGATGGGGTTATCATGCCGCTTCAGGTCGCGACT ACTAGCTACAACTATACGGTAAGCCGCGATCCGGTACTTTCTCCGCCCAGTAAAGAGCAAGCTCCGGAAT TGTTGCACCTTGGGCCACGTGGCCAGACAGAAGCTGTACTCGCTCGCGAAACAGCATTGACAGGAAGATG GCCAACACGCGAGCGTGAGCAGCAAGTCTATCGAGAGTTTTTAGCCCTTTATGACGTCAAGAAGGACCTG GAGGCCAAGACACTTGGGTTGCGGAAGAAAAAAGCTGCGCTTGTTTCCGCGTTGAACCGGACTGCCGCCT CAATAGGCACTTCACCCTTGAAAGCCCAATCGTCGAGCGCAGAAGTTGAAAAAGCAACTCACGAGTTTGA TGAACGACGGGTTTATGATCCGCGCGATCGCGGTCGGGACAAAGCATTACAACGGTGA |
| Reference |
(1) Hodges LD; Lee LY; McNett H; Gelvin SB; Ream W (2009). The Agrobacterium rhizogenes GALLS gene encodes two secreted proteins required for genetic transformation of plants. J Bacteriol. 191(1):355-64. [PudMed:18952790] 
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| experimental literature |