| Effector Protein ID: 190014785 |
 T4SS name [ID] | VirB [15] |
| Gene symbol | virD5 |
| Locus tag | pTiBo151 |
| Strain | Agrobacterium tumefaciens plasmid Ti plasmid pTiBo542 (NC_010929) |
| Replicon | plasmid Ti plasmid pTiBo542 [GenBank: NC_010929] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 169614..172124 [+] |
| Product | VirD5 |
| Effector type | Protein |
| Descripton | VirD5 |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirD5 interacts with and stabilizes VirF in plants. |
| UniProt ID | A5WY68 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Agro_virD5 [PF04730], Evalue: 0, Aligned region: 62..836 |
| Protein Sequence: 836 a.a. [Download] |
| >gi|190014785|ref|YP_001967549.1| VirD5 [Agrobacterium tumefaciens] MTGKSKVHIRGSADALPDVPGGSTTAPFLTEPSRDQVDASFEVQTDYSQSTSVSFTYDGVGLGPAERAAY ENWCEPGRPTWKDLIIKARVDPIDDVTWLRDLEEDTPSTFRYEGMPLGIGERQAYENWQEDAQPTWEDLV VSARLTELGRPHGITGEYTSLAGSKNTSSISLKRKRSNLIDDENSSGSFSYDGMKLGEAERSAYGDWAEA EPPTWKDLVLRARVSSINDSAWLFDSQTSSSSFEYNGVPLGEPERQALRQWQGDAQPTWEDLVVNARMAE LCHAGWIEGQKGCFEERGEALPASERGSQRPIGQRTDSSDSFVYDGTRLGAPERTAYERWSKRERPTWED LILDAHQARTESDAVTTQAIGQSSSPVFLYEGKSLGDRERKAYEKWRQPAQPRWQNLVVNARLAEIDPSA WIADERDPLDDSDALGRPSYTSLTDRSDVPLDDQSIYRRSDLVREQVPESSQRQFAACSESETRPVQWFT ASGSDANNTENITASDPVDRTGGVKRLGSKSDRTVTASIHDVNSSTRRLLLNEFGSEAPRPSPEKTVRLR SDNIGTYGSRKNERARLATETGAYESEHIFGFKAVHDTARATKEGRRLERPMPAYLEDKGLHRQHIGTGR GRTKLVGRGWPDDTSYRSDQRATLSDPVARSEGATASNGYQLNQLGYAHQLASDGLQSESPDGVALPIQV ATTSYNYTVSRDPVLVPPDKNEAPQLLHLGPRGQTEAVLARETALTGKWPTLEREQQVYREFLALYDVKK DLEAKSVGVRRKKKEVISALDRTARLISTSPSKARSKAETEKAIDELDDRRVYDPRDRAQDKAFKR |
| - |
| Nucleotide Sequence: 2511 bp [Download] |
| >gi|190014640|ref|NC_010929.1|:169614-172124 Agrobacterium tumefaciens Ti plasmid pTiBo542, complete sequence ATGACAGGAAAGTCGAAAGTTCACATAAGAGGTTCGGCTGACGCGCTTCCTGACGTTCCTGGCGGAAGTA CTACCGCCCCTTTTTTAACCGAACCTTCTCGGGATCAGGTTGATGCCTCGTTTGAGGTCCAAACCGACTA CAGCCAGTCTACTTCCGTGTCGTTTACCTATGATGGTGTTGGACTTGGTCCTGCCGAGCGTGCGGCTTAC GAGAACTGGTGCGAACCGGGCCGGCCCACTTGGAAAGATCTTATAATCAAGGCACGTGTCGATCCGATTG ACGATGTGACCTGGCTCCGAGATTTAGAAGAGGACACCCCCTCAACCTTCAGATACGAAGGGATGCCTCT GGGCATCGGGGAACGACAGGCCTACGAAAATTGGCAAGAGGACGCTCAGCCGACATGGGAAGACCTTGTT GTCAGCGCACGCTTGACGGAACTTGGCCGTCCACACGGGATTACCGGCGAGTATACATCCCTCGCAGGAT CGAAGAATACAAGTTCAATTTCATTGAAGCGAAAGCGGAGCAACTTAATTGATGATGAGAATTCATCCGG ATCGTTTTCATATGACGGGATGAAGCTCGGGGAAGCCGAGCGTTCTGCATATGGTGACTGGGCCGAGGCG GAGCCACCCACGTGGAAAGATTTGGTATTGAGGGCACGCGTTTCCTCGATCAATGACTCTGCTTGGCTTT TTGATTCACAAACATCTTCATCATCATTTGAATACAACGGTGTTCCCTTGGGCGAGCCGGAACGGCAGGC TCTCAGACAATGGCAAGGAGACGCTCAGCCTACCTGGGAAGATCTCGTTGTTAACGCGCGTATGGCAGAA CTTTGCCATGCTGGTTGGATTGAAGGTCAAAAAGGTTGCTTTGAAGAGCGCGGGGAGGCTCTGCCCGCGT CGGAACGCGGTTCGCAACGCCCCATTGGTCAACGGACAGATTCCTCCGATTCTTTTGTGTATGATGGCAC AAGGCTCGGAGCACCTGAGCGAACTGCTTATGAACGCTGGAGTAAGAGGGAACGCCCGACTTGGGAAGAT CTCATCTTAGATGCACACCAGGCCAGGACTGAAAGTGACGCTGTTACGACCCAAGCGATTGGTCAGTCGT CCTCACCGGTTTTCTTATATGAAGGAAAGTCGCTCGGAGACAGGGAACGAAAGGCTTACGAAAAATGGCG GCAGCCAGCCCAACCGCGATGGCAAAATCTTGTAGTGAACGCTCGTCTGGCAGAAATCGATCCCTCAGCC TGGATTGCCGATGAGCGCGATCCGCTTGATGATAGCGACGCGCTTGGTCGCCCGTCGTACACAAGCTTGA CGGATAGATCAGACGTCCCTTTAGACGATCAATCAATCTATCGTCGTTCCGACCTAGTAAGGGAGCAGGT GCCAGAATCGTCTCAAAGGCAATTCGCAGCATGTTCAGAATCTGAAACGAGGCCTGTGCAATGGTTTACT GCTTCTGGGTCAGATGCAAACAATACGGAAAATATCACCGCCAGCGATCCCGTCGATCGCACGGGTGGAG TTAAGCGGCTAGGCTCCAAAAGCGACAGAACCGTTACAGCTTCTATCCATGACGTGAATTCCAGCACAAG GCGACTGTTGCTTAACGAATTTGGATCGGAGGCTCCGCGCCCTTCGCCAGAAAAGACTGTTCGCTTAAGA AGCGACAATATTGGCACCTATGGGAGCCGGAAAAATGAACGAGCGCGGCTCGCGACCGAAACCGGTGCGT ATGAGTCGGAGCATATTTTCGGGTTCAAGGCTGTCCACGATACTGCGAGAGCGACGAAAGAGGGCCGGCG TCTCGAAAGGCCCATGCCCGCCTACCTTGAGGATAAGGGGCTTCATCGCCAACATATTGGCACCGGGAGA GGACGGACCAAACTTGTCGGGCGCGGATGGCCGGATGACACAAGCTATCGCTCGGATCAAAGGGCAACTC TGTCGGACCCCGTTGCGCGCTCGGAAGGCGCGACGGCCTCAAATGGGTATCAATTGAACCAATTGGGTTA CGCGCACCAACTCGCTAGCGATGGCCTGCAAAGTGAATCGCCCGATGGTGTTGCCTTGCCAATTCAAGTG GCAACAACGAGCTACAACTATACAGTGAGCCGCGATCCTGTCCTTGTTCCGCCGGATAAAAACGAAGCCC CTCAATTGCTGCATCTTGGTCCCCGTGGTCAAACCGAAGCTGTTCTTGCCCGCGAAACAGCATTGACTGG AAAATGGCCGACTCTCGAGCGTGAGCAGCAAGTGTATCGCGAGTTTTTGGCCTTATATGACGTAAAAAAA GATCTTGAGGCCAAATCAGTCGGCGTAAGACGGAAAAAAAAAGAAGTTATTTCTGCGTTAGACCGAACTG CGCGCTTGATAAGCACGTCGCCTTCGAAAGCTCGATCCAAAGCAGAGACTGAAAAAGCCATTGATGAGCT CGATGATCGACGAGTTTATGATCCGCGTGATCGAGCTCAAGACAAAGCGTTTAAACGCTGA |