| Effector Protein ID: 16119971 |
 T4SS name [ID] | VirB [19] |
| Gene symbol | virF |
| Locus tag | Atu6154 |
| Strain | Agrobacterium tumefaciens str. C58 |
| Replicon | plasmid Ti [GenBank: NC_003065] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 172489..173427 [+] |
| Product | exported virulence protein |
| Effector type | Protein |
| Descripton | VirF |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirF may be involved in targeted proteolysis of proteins, such as certain Virulence effector proteins, that must be stripped from T-strands prior to or during T-DNA integration. |
| UniProt ID | Q7D2D9, O50245 |
| KEGG ID | atu:Atu6154 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 312 a.a. [Download] |
| >gi|16119971|ref|NP_396676.1| exported virulence protein [Agrobacterium tumefaciens str. C58] MEPSQRSLSDESEASRTEVHSTSTNRDMPPELLAKVATYIPTQDPVETARNLGSLERTGRAGREAVTSDP VGKYHARMKRIGASAKTVFDTVIPGNQLPEWETNRPSPTARTRAVGPILKFQSEAGKSRFVTNILNLPES AQCDAILSVIKHLNDLGEANKTRLIERSIEILRLEPPLTWNMGQKCPAVDVLVQGEKYLNADQLARIQQE RSSRPRLSPLFGRAIADFEVQKTMDANPRRYRDAAGPEVRAVDTVIETIERYSASLARGGPNAVGLLTTN ESFEKNINEVYNRTRAELDASSRDRSRSGLSR |
| - |
| Nucleotide Sequence: 939 bp [Download] |
| >gi|159161952|ref|NC_003065.3|:172489-173427 Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence ATGGAGCCCAGCCAACGAAGCTTAAGTGATGAATCCGAAGCGTCCCGTACGGAAGTCCATTCTACATCGA CAAATAGGGATATGCCTCCCGAGCTTTTGGCTAAGGTGGCAACTTATATTCCTACCCAGGACCCGGTAGA AACGGCACGAAATCTTGGAAGCCTGGAACGTACAGGGCGTGCAGGTCGTGAAGCCGTTACAAGTGATCCC GTCGGAAAATATCACGCGCGAATGAAACGAATTGGCGCCTCCGCCAAAACCGTGTTCGATACGGTCATTC CCGGAAATCAATTACCTGAGTGGGAGACGAACCGACCCTCTCCGACGGCCAGAACGCGAGCCGTTGGCCC AATTCTTAAGTTCCAGTCTGAAGCGGGAAAATCGAGATTTGTCACCAATATACTCAATTTGCCTGAATCT GCTCAGTGCGACGCAATTCTTAGTGTCATAAAACACTTGAATGATCTTGGTGAAGCAAACAAGACGCGAC TTATCGAACGCTCTATCGAAATTTTGCGGCTAGAACCCCCTTTGACCTGGAATATGGGCCAGAAATGCCC TGCGGTCGACGTGCTGGTCCAAGGCGAAAAGTACCTAAATGCGGATCAACTGGCTCGCATACAACAAGAG AGGAGCAGCCGTCCGCGGCTGTCTCCCCTGTTTGGCCGAGCCATAGCCGATTTCGAGGTTCAAAAAACCA TGGACGCAAATCCTAGACGATATAGGGACGCGGCGGGGCCTGAGGTCAGAGCTGTAGACACAGTAATTGA GACAATTGAGAGATATAGTGCGTCGTTAGCAAGAGGCGGTCCAAATGCAGTGGGACTCCTAACGACGAAC GAAAGCTTTGAGAAAAATATCAATGAGGTCTACAACCGTACGCGAGCCGAGCTAGACGCTTCTTCACGTG ACAGAAGTCGCTCTGGACTATCGCGATAA |
| Reference |
(1) Aguilar J; Zupan J; Cameron TA; Zambryski PC (2010). Agrobacterium type IV secretion system and its substrates form helical arrays around the circumference of virulence-induced cells. Proc Natl Acad Sci U S A. 107(8):3758-63. [PudMed:20133577] 
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| experimental literature |