| Effector Protein ID: 148360030 |
 T4SS name [ID] | Dot/Icm [42] |
| Gene symbol | sdeD |
| Locus tag | LPC_1961 |
| Strain | Legionella pneumophila str. Corby |
| Replicon | chromosome [GenBank: NC_009494] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 3008018..3009166 [-] |
| Product | Dot/Icm system substrate protein SdeD |
| Effector type | Protein |
| Descripton | SdeD |
| T4CP requirement | T4CP Depedent |
| Target/Effection | Unknown |
| UniProt ID | A5IEU1 |
| KEGG ID | lpc:LPC_1961 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | SidE [PF12252], Evalue: 3.3e-35, Aligned region: 6..258 |
| Protein Sequence: 382 a.a. [Download] |
| >gi|148360030|ref|YP_001251237.1| Dot/Icm system substrate protein SdeD [Legionella pneumophila str. Corby] MPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGKQLHRPIHGLA HTMRTLMYSQLMHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYG AKQFEEYARKHLTHLFSEEEIQLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGV SGIVPTLIHLFGKQDGLDIMHYARGLFAATGEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEAD PKKTAQAGFSVDGCYSALTSVPTPSWYEKELKEVDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTEKP GSFVEKFLKPFMIWKKPELQTTQPTTEKTNRP |
| - |
| Nucleotide Sequence: 1149 bp [Download] |
| >gi|295815281|ref|NC_009494.2|:c3009166-3008018 Legionella pneumophila str. Corby chromosome, complete genome GTGCCTATTATTCTAGATTCTGATGTGTTGGAAGTGGCGGAATATGTGTATAAAACACGCCTATCTCAGC CTTACACTGAAGTCGGTTCTGAATGGGAGTATAATTACAAAAAGCCAACAGCTACCTATGCAAAAGGCGA TGGTCATAATTTGCAAAGGTACATTACGATTGATGGCAAGCAGCTTCATCGCCCTATCCATGGCTTAGCC CATACGATGCGCACATTGATGTATAGCCAATTGATGCATTGCTCCTCAAAAAAACAACTTTTCCCACACG TATGCCAGGACGGACGAACAATAGCCGATCTCAGTGAACTTGATCTTAAAAAGATAAACATCGCGCAGTT ATTTTTTGTAGCCGGGCGCGAAAGCGAGGCTTCTTATGGTGATGCTTATCATCGTTATCATCTGTATGGG GCTAAACAGTTCGAAGAATATGCTCGCAAGCATTTGACTCATCTTTTCTCAGAAGAAGAAATCCAATTGT ACTCACGATGTATAGAAGACAGGGTAGGTGACAGTTTTGATGGTACCCCTGAAGGTTATATAATTCACTT GTCACACATGATCGATTTGATGCGCTGTAAAAGCCCGGTTGAAGTTTTTTTGGGGCACTCAAAAGGGGTT TCTGGTATTGTACCTACATTGATTCACTTGTTTGGCAAACAAGATGGCTTGGATATTATGCATTACGCGC GAGGCTTGTTTGCGGCTACAGGTGAAGCAGTACCCTATATTGATTCATCTGAATGGCCTCATTTGGGAGT TGATTTGAGTCGGGTACAACGTGCTCTCTCTATCGTTGGTGATATCAATGTCCCTGGGCAAGAGGCGGAT CCTAAAAAAACAGCGCAAGCCGGTTTTTCAGTGGATGGTTGTTATTCCGCGTTAACCAGTGTGCCTACAC CTTCCTGGTATGAGAAAGAGTTAAAAGAAGTCGATGATGAAAAAATCGATGTTAAGGAAGTTGATGATAG GGAGATAGAAAAAGAACATGAGATAGTTGTTCCTTCGCAGGCAACAACACCTTTAAGTACAGAAAAACCC GGCTCTTTTGTCGAAAAATTTCTGAAGCCATTTATGATTTGGAAAAAGCCAGAGTTACAAACGACTCAGC CAACAACGGAGAAGACTAACAGACCTTAA |
| Reference |
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] 
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| in silico analysis literature |