| Effector Protein ID: 148358957 |
 T4SS name [ID] | Dot/Icm [42] |
| Gene symbol | - |
| Locus tag | LPC_0842 |
| Strain | Legionella pneumophila str. Corby |
| Replicon | chromosome [GenBank: NC_009494] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 1640575..1643226 [+] |
| Product | hypothetical protein |
| Effector type | Protein |
| Descripton | VpdC |
| T4CP requirement | T4CP Depedent |
| Target/Effection | Unknown |
| UniProt ID | A5IBR8 |
| KEGG ID | lpc:LPC_0842 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Patatin [PF01734], Evalue: 4.3e-27, Aligned region: 304..495 |
| Protein Sequence: 883 a.a. [Download] |
| >gi|148358957|ref|YP_001250164.1| hypothetical protein LPC_0842 [Legionella pneumophila str. Corby] MTPQHVISQLLESDTKYPQNLDLLKKIIISAYLGRLRINGLPPDNKIALGNYLFDDERMIFDFTRLSDSK RALFIEWLLESHQKDKEHGFLSGVYVNEYRGFTAEVALSWWGILKNWLFNNKSEHWKITDLGLSVNYQLT GIEMCHGKQGILIGFNQFLVPPSGTKYRDPNDNQSEPLGNVKRVFITDKLVDELVGLNYKNLNYESVCKS PHPQSIDVTDPEARHKDMYDYRKMQRFNGVRPWYIRLWRWISKLFFGDTYDAKKTSTADDNLELLYKTKT VKIYQRSKSKEILVTEKRPDITNLVFCGGGAKIFAHVGVWKALNEAGMKPTKFAGSSAGAIMSLMCYLGY TADEISELFQHFKQEHLVQFDIDRNGLSDTHSLKTALDYAIANKVRQIVNKYKIPYPKGKITFSTLASLR EQFPDCGIGKELIVTATNKRSGKTIYLSANRYPLLEVSEAVKISASFPVLYRDTLLDGEEHNDGGILSNF PTEVFFDDHSTLLESEFGNNLKVLAVQFDNGIERNVIDRIMDKVYRENFVLNWIYSLLTGVSDPASGWER DRLKLRQYALQTIIPETGKVSTTGFNVERQSQEELIQNGYQSTLDYLNVRYTRKNNSYVNKEIMYSTFNS LGDLLAYCCYRGDEQWFNVVNNLIVQSTLPNRTALMKQSLELRKLYFNTSLPSNPEKNKTACNESNTLTF FGNAVCQHHNHSQELENGNHDVLLALYPIFLKLSTDLLINKIDKNLLDRARHSLNIHSPFDCLEHFNKIS GNAHVMIHIIVKLIKELKERSCQQIYDVLKEVRHLLYSDINLMKANYFGKWDLSLPQCIRILNLLKQEKH DDVSRQLDCLRNQMEPVQTVKGGVHHDDLNNGGHERYRLGLGV |
| - |
| Nucleotide Sequence: 2652 bp [Download] |
| >gi|295815281|ref|NC_009494.2|:1640575-1643226 Legionella pneumophila str. Corby chromosome, complete genome ATGACCCCACAGCACGTCATAAGTCAACTGCTGGAATCTGACACCAAATACCCTCAGAATTTAGATTTAT TAAAAAAAATAATCATATCAGCTTATCTGGGACGCCTCAGAATTAATGGATTACCTCCAGATAACAAGAT TGCACTTGGAAATTATTTATTTGATGATGAACGTATGATTTTTGATTTCACTCGATTGAGTGATTCAAAA AGAGCTTTATTTATTGAATGGTTGCTTGAGTCTCATCAAAAAGATAAAGAGCATGGTTTTTTAAGTGGCG TTTACGTGAATGAATATCGAGGTTTCACTGCGGAGGTTGCTTTAAGCTGGTGGGGTATCTTAAAAAACTG GTTATTTAATAATAAATCTGAGCATTGGAAAATAACGGATTTGGGACTTTCTGTCAATTATCAGTTGACT GGTATTGAAATGTGTCATGGAAAGCAGGGTATCTTAATTGGATTTAACCAGTTTTTAGTACCACCTTCAG GTACAAAATACAGAGATCCTAATGATAACCAAAGTGAGCCATTAGGTAATGTTAAAAGAGTATTCATTAC TGATAAACTGGTTGATGAACTTGTTGGACTCAATTATAAAAATCTTAATTATGAGTCTGTCTGTAAAAGC CCTCATCCGCAATCTATTGATGTAACTGATCCAGAAGCTCGTCATAAAGACATGTATGATTATAGAAAAA TGCAACGTTTCAATGGTGTGAGGCCTTGGTATATCAGACTTTGGAGATGGATATCTAAACTATTTTTTGG CGATACATACGACGCTAAAAAAACAAGCACTGCAGACGACAATTTGGAATTACTTTATAAAACTAAAACT GTCAAAATTTATCAGCGCTCCAAATCAAAAGAGATCTTGGTCACAGAGAAGCGACCTGATATTACTAATT TGGTTTTTTGTGGAGGTGGGGCAAAAATTTTTGCTCACGTGGGGGTTTGGAAGGCTCTCAATGAAGCAGG AATGAAGCCAACCAAATTTGCAGGAAGCTCTGCCGGTGCAATCATGTCTTTGATGTGCTACCTAGGTTAT ACTGCTGATGAAATTAGTGAACTTTTCCAGCATTTTAAACAAGAGCATTTAGTTCAATTTGATATAGACA GAAATGGATTATCGGATACCCATTCCTTAAAAACGGCGCTGGATTATGCTATCGCAAATAAAGTAAGGCA AATAGTAAATAAATATAAAATTCCATATCCTAAGGGAAAAATAACTTTTAGTACTTTAGCTTCTCTAAGA GAGCAATTTCCAGATTGTGGAATAGGCAAAGAATTAATTGTTACAGCAACAAATAAACGCTCAGGAAAAA CTATTTATTTATCAGCAAATCGTTACCCATTATTGGAGGTCAGTGAAGCAGTTAAAATTTCTGCGAGCTT TCCAGTTTTGTATAGAGATACTCTGCTGGATGGTGAAGAGCATAATGATGGTGGAATATTAAGTAATTTT CCAACCGAAGTTTTTTTTGATGACCACTCAACGCTGTTGGAGTCTGAATTTGGTAATAATTTAAAAGTAT TGGCAGTTCAATTTGATAATGGGATTGAAAGAAATGTTATTGATAGAATAATGGACAAAGTTTATCGAGA GAATTTCGTTCTTAACTGGATTTATAGCTTACTGACTGGAGTGAGTGATCCTGCAAGTGGATGGGAAAGA GACCGCCTTAAATTAAGACAATATGCTCTTCAAACTATAATTCCTGAAACAGGGAAAGTATCAACAACAG GATTTAATGTAGAGAGGCAGAGCCAGGAGGAGTTGATCCAAAATGGTTATCAATCAACTCTGGATTATCT TAATGTAAGATATACTAGAAAAAACAACAGCTATGTTAACAAGGAAATAATGTATTCTACTTTCAATTCT TTGGGAGATTTGCTTGCTTACTGTTGTTACAGGGGAGATGAACAATGGTTTAATGTTGTTAATAATCTAA TTGTGCAATCTACCTTACCTAATCGTACTGCTTTAATGAAACAATCCCTTGAACTTAGAAAACTTTATTT TAATACGTCTCTACCATCTAACCCTGAAAAGAATAAAACAGCTTGTAATGAAAGCAATACTTTAACTTTT TTTGGTAATGCGGTTTGTCAGCATCATAATCACAGCCAGGAACTTGAAAATGGAAACCATGATGTCTTAT TGGCGCTCTATCCAATTTTTTTAAAACTATCTACTGATTTATTAATAAATAAAATTGATAAGAACCTATT AGACCGTGCACGTCATTCACTAAATATACACTCTCCCTTTGATTGTCTTGAGCATTTTAATAAAATTTCA GGAAATGCTCATGTTATGATTCATATCATCGTTAAATTAATTAAAGAGCTCAAAGAAAGATCATGCCAAC AAATTTATGATGTATTAAAAGAGGTTAGGCATTTATTGTATAGCGATATTAATCTTATGAAAGCAAATTA TTTTGGCAAATGGGATTTAAGTCTCCCTCAATGTATACGGATCTTGAATTTGTTAAAACAGGAAAAGCAT GACGATGTATCTCGGCAATTGGATTGCCTACGTAACCAAATGGAGCCTGTGCAAACAGTAAAAGGAGGAG TGCATCATGATGACCTTAATAACGGGGGCCACGAGAGGTATAGGCTTGGCCTTGGCGTATGA |
| Reference |
(1) Gomez-Valero L; Rusniok C; Cazalet C; Buchrieser C (2011). Comparative and functional genomics of legionella identified eukaryotic like proteins as key players in host-pathogen interactions. Front Microbiol. 2:208. [PudMed:22059087] 
|
| in silico analysis literature |