| Effector Protein ID: 10955161 |
 T4SS name [ID] | VirB [7] |
| Gene symbol | virD5 |
| Locus tag | pTi_145 |
| Strain | Agrobacterium tumefaciens plasmid Ti (NC_002377) |
| Replicon | plasmid Ti [GenBank: NC_002377] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 172711..175212 [+] |
| Product | hypothetical protein |
| Effector type | Protein |
| Descripton | VirD5 |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirD5 interacts with and stabilizes VirF in plants. |
| UniProt ID | Q9JN11 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Agro_virD5 [PF04730], Evalue: 0, Aligned region: 32..69 Agro_virD5 [PF04730], Evalue: 0, Aligned region: 58..833 |
| Protein Sequence: 833 a.a. [Download] |
| >gi|10955161|ref|NP_059817.1| hypothetical protein pTi_145 [Agrobacterium tumefaciens] MTGKSKVHIRSSADTLPDGSITAPFSTGLSGDQADASFEAQTDYSQSTSVSFTYDGVKLGPAERAAYENW CEPGRPTWKDLIIKARVDPIDDVIWLRDLEEDTPSTFRYEGMPLGLGERKAYENWQEDAQPTWEDLVVSA RMTELGRPHGITGEYTSLAGSKNTSSISLKRKRSNLIDDENSSGSFSYDGMKLGEAERSAYGDWAEAEPP TWKDLVLRARVSSINDSAWLFDSQTSSSSFEYNGVPLGEPERQALRQWQGDAQPTWEDLVVNARMAELCH AGWIEGQKGCFEKRGEALHASERGSQRPIVQRTDSSDSFLYDGRRLGAPERTAYERWSKRERPTWEDLIL DAHQARIESDAVTTQAIGQSSSLVFLYEGKSLGCREREAYEKWRQPAQPRWQNLVVNARLAELDPSVWIA DERDPLDDGDALGRPSYTSLTDRSDVPLDDQSIYHRSDLVREQVSESSQKQFAACSESETIPVSWFTASG LDANNTENIAASDPVDGTGGVKRLGSKSDRTVTASIHDVNSSTKRLLLNEFGLEAPRPSPEKTVRLRSDN IGTYGSRRNERMRLATETGAYESEHIFGFKAVHDTARATKEGRRLERPMPAYLEYKGLHRQHVGTGRGRT KLVGRGWPDDTSYRSDQRATLSDPVARSEGATASNGYQLNQLGYAHQLASDGLQSESPDGVALPIQVATT SYNYTVSRDPVLVPPDKNEAPQLLHLGPRGQTEAVLARETALTGKWPTLEREQQVYREFLALYDVKKDLE AKSVGVRQKKKEVSSALDRTARLIITSPSKARSEAETEKAIDELDDRRVYDPRDRAQDKAFKR |
| - |
| Nucleotide Sequence: 2502 bp [Download] |
| >gi|10955016|ref|NC_002377.1|:172711-175212 Agrobacterium tumefaciens plasmid Ti, complete sequence ATGACAGGAAAGTCGAAAGTTCACATAAGGAGTTCGGCTGACACGCTTCCTGACGGAAGTATTACCGCCC CTTTTTCAACCGGACTTTCTGGGGATCAGGCTGATGCCTCGTTTGAGGCCCAAACCGACTACAGCCAGTC TACTTCCGTGTCGTTTACCTATGATGGTGTTAAACTTGGTCCTGCCGAGCGTGCGGCTTACGAAAACTGG TGCGAACCGGGCCGGCCCACGTGGAAAGACCTTATAATCAAGGCACGTGTCGATCCAATTGACGATGTGA TCTGGCTCCGAGATTTAGAAGAGGACACCCCCTCAACCTTCAGATACGAAGGGATGCCTTTGGGCCTCGG GGAACGAAAGGCCTACGAAAATTGGCAAGAGGACGCTCAGCCGACATGGGAAGACCTTGTTGTCAGCGCA CGCATGACGGAACTTGGCCGTCCACACGGGATTACCGGCGAGTATACCTCCCTCGCAGGGTCGAAGAATA CAAGTTCAATTTCATTGAAGCGAAAGCGGAGCAACTTAATTGATGATGAGAATTCATCCGGATCGTTTTC ATATGACGGGATGAAGCTCGGGGAAGCCGAGCGTTCTGCATATGGTGACTGGGCCGAGGCGGAGCCACCG ACTTGGAAAGATTTGGTATTGAGGGCACGCGTTTCCTCGATCAATGACTCTGCGTGGCTTTTTGATTCAC AAACATCTTCATCATCATTTGAATACAACGGTGTTCCCTTAGGCGAGCCGGAACGGCAGGCTCTCAGACA ATGGCAAGGAGACGCTCAGCCTACCTGGGAAGATCTCGTTGTTAACGCGCGTATGGCAGAACTTTGCCAT GCTGGTTGGATTGAAGGTCAGAAAGGTTGCTTTGAAAAGCGCGGGGAGGCTCTGCACGCGTCGGAACGCG GCTCGCAACGCCCCATTGTTCAACGGACAGATTCCTCCGATTCTTTTTTGTATGACGGCAGAAGGCTCGG AGCCCCTGAGCGAACTGCTTATGAACGCTGGAGTAAGAGGGAACGCCCGACCTGGGAAGATCTCATCTTG GATGCACACCAGGCCAGGATTGAAAGTGATGCTGTTACGACCCAAGCGATTGGTCAGTCGTCCTCACTGG TTTTCTTATATGAAGGAAAGTCGCTCGGATGCAGGGAACGAGAGGCTTACGAAAAATGGCGGCAGCCAGC TCAACCGCGATGGCAAAATCTTGTAGTGAACGCTCGTCTGGCAGAGTTGGATCCCTCAGTCTGGATTGCC GATGAGCGCGATCCGCTTGATGATGGCGACGCGCTTGGTCGCCCGTCGTACACAAGCTTGACGGATAGAT CAGACGTCCCTTTAGACGATCAATCAATCTATCATCGTTCCGACCTAGTAAGGGAGCAGGTGTCAGAATC GTCTCAAAAGCAATTCGCAGCATGTTCAGAATCTGAAACGATTCCTGTGTCATGGTTTACTGCTTCTGGG TTAGATGCAAACAATACGGAAAATATCGCCGCCAGCGATCCCGTCGATGGCACGGGGGGAGTTAAGCGGT TAGGCTCCAAAAGCGACAGAACCGTTACAGCTTCTATCCATGACGTGAATTCCAGCACGAAGCGACTGTT GCTTAACGAATTTGGATTGGAGGCTCCGCGCCCTTCGCCAGAAAAGACTGTTCGCTTAAGAAGCGACAAT ATTGGCACCTATGGGAGCCGGAGAAATGAACGAATGCGGCTCGCGACCGAAACCGGTGCGTACGAGTCGG AGCATATTTTCGGGTTCAAGGCTGTCCACGATACCGCGAGAGCGACAAAAGAGGGCCGGCGTCTCGAAAG GCCCATGCCCGCCTACCTTGAGTATAAGGGGCTTCATCGCCAACATGTTGGCACCGGGAGAGGACGGACC AAACTTGTCGGGCGCGGATGGCCGGATGACACAAGCTATCGCTCGGATCAAAGGGCAACTCTGTCGGACC CCGTTGCGCGCTCGGAAGGCGCGACGGCGTCTAATGGGTATCAATTGAACCAATTGGGTTACGCGCACCA ACTTGCTAGCGATGGTCTGCAAAGTGAATCGCCCGATGGTGTTGCCTTGCCAATTCAAGTGGCAACAACG AGCTACAACTATACAGTGAGCCGCGATCCTGTCCTTGTTCCGCCGGATAAAAACGAAGCCCCTCAATTGC TGCATCTTGGTCCCCGTGGGCAAACCGAAGCTGTTCTTGCCCGCGAAACAGCATTGACTGGAAAATGGCC GACTCTCGAGCGTGAGCAGCAAGTGTATCGCGAGTTTTTGGCCTTATATGACGTCAAAAAGGATCTTGAG GCCAAATCCGTCGGCGTAAGACAGAAAAAAAAAGAAGTTAGTTCTGCCTTAGACCGAACTGCGCGCTTGA TAATCACGTCGCCTTCGAAAGCTCGATCCGAAGCAGAGACTGAAAAAGCCATTGACGAGCTCGATGATCG ACGAGTTTATGATCCGCGTGATCGAGCTCAAGACAAAGCGTTTAAACGCTGA |
| Reference |
| (1) Ream W (2009). Agrobacterium tumefaciens and A. rhizogenes use different proteins to transport bacterial DNA into the plant cell nucleus. Microb Biotechnol. 2(4):416-27. [PudMed:21255274] |