| Effector Protein ID: 10954792 |
 T4SS name [ID] | VirB [20] |
| Gene symbol | riorf146 |
| Locus tag | pRi1724_p147 |
| Strain | Agrobacterium rhizogenes plasmid pRi1724 (NC_002575) |
| Replicon | plasmid pRi1724 [GenBank: NC_002575] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 181541..182389 [+] |
| Product | hypothetical protein |
| Effector type | Protein |
| Descripton | VirF |
| T4CP requirement | T4CP Depedent |
| Target/Effection | VirF may be involved in targeted proteolysis of proteins, such as certain Virulence effector proteins, that must be stripped from T-strands prior to or during T-DNA integration. |
| UniProt ID | Q9F5A7 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 282 a.a. [Download] |
| >gi|10954792|ref|NP_066727.1| riorf146 [Agrobacterium rhizogenes] MYLQKLLPTFQPQDVVETARDLGNLERTGSAGREALRRGPIGIYHARVKRIGTSAKAVFDTIIPGEQLPD WQVNRPSETARTRAVGPLLKFQSEAGKARFTTNILNLPQPDQCDAILSVIKHLDDLGEVNKTRLIERSIE ILQLDPPLTWNQGQKCPAADVLVQGEKHLNDDQKTRVQHERNNRPELLRLFRRAVADFEIEKNMAAHPRR YQDAKEPEVKPIDEVIDIIERYSRSVVTRGPNAIGLLTAHESFVKNVGDAYTRTRAEFDSSSRDRDRSAL SR |
| - |
| Nucleotide Sequence: 849 bp [Download] |
| >gi|10954646|ref|NC_002575.1|:181541-182389 Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence ATGTACTTGCAAAAGTTGCTACCTACGTTCCAACCACAGGATGTGGTCGAAACCGCACGAGATCTCGGAA ATCTAGAGCGAACTGGCTCCGCAGGTCGCGAAGCTTTACGTCGAGGCCCTATCGGAATTTATCACGCTCG CGTGAAAAGGATTGGTACATCGGCAAAAGCAGTCTTCGATACAATCATCCCTGGGGAGCAATTGCCTGAT TGGCAGGTGAACCGGCCATCTGAAACGGCAAGAACGCGGGCGGTAGGACCACTTCTGAAGTTTCAATCTG AGGCTGGAAAAGCACGATTCACAACCAACATCCTGAACCTCCCTCAGCCTGATCAGTGCGACGCAATTCT GAGCGTGATAAAGCATCTGGACGATCTTGGGGAAGTCAATAAGACGCGCTTAATCGAACGTTCGATCGAA ATCTTGCAGCTTGATCCCCCTCTTACTTGGAACCAGGGTCAGAAATGCCCCGCCGCAGACGTATTGGTCC AGGGCGAGAAGCACTTAAACGACGACCAAAAAACTCGGGTACAACACGAGAGGAACAATCGCCCGGAGCT GCTGCGCCTGTTCCGCCGGGCTGTCGCAGACTTTGAGATTGAAAAAAACATGGCGGCGCATCCCCGCAGG TATCAAGACGCGAAAGAACCGGAGGTGAAACCTATCGACGAGGTGATTGACATAATCGAAAGATATAGTC GATCGGTCGTGACGAGAGGGCCAAATGCTATCGGCCTTCTGACGGCACACGAGAGTTTCGTCAAGAACGT CGGTGATGCCTACACCCGTACGCGCGCCGAATTCGATTCATCCTCCCGCGATCGGGACAGATCGGCATTG TCACGGTAA |
| Reference |
(1) Hodges LD; Cuperus J; Ream W (2004). Agrobacterium rhizogenes GALLS protein substitutes for Agrobacterium tumefaciens single-stranded DNA-binding protein VirE2. J Bacteriol. 186(10):3065-77. [PudMed:15126468] 
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| experimental literature |