SecReT4

T4SS
References

T4SS ID	770
Strain	Rhodoferax ferrireducens T118
Replicon	plasmid plasmid1 [Browse all T4SS(s) in this replicon]
Accession	NC_007901
Location	6727..23084
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	0	0	0	1

The information of T4SS components from NC_007901

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Rfer_4247	1803..3113 [-], 1311	89885734	hypothetical protein
2	Rfer_4248	3123..3644 [-], 522	89885735	hypothetical protein
3	Rfer_4249	3647..5098 [-], 1452	89885736	hypothetical protein
4	Rfer_4250	5114..5593 [-], 480	89885737	hypothetical protein
5	Rfer_4251	5603..6730 [-], 1128	89885738	hypothetical protein
6	Rfer_4252	6727..8049 [-], 1323	89885739	conjugation TrbI-like protein	TrbI
7	Rfer_4253	8100..8912 [-], 813	89885740	conjugal transfer protein TrbG/VirB9/CagX	TrbG
8	Rfer_4254	8912..9655 [-], 744	89885741	Type IV secretory pathway component VirB8-like	TrbF
9	Rfer_4255	9877..11943 [-], 2067	89885742	AAA ATPase, central region
10	Rfer_4256	11943..12350 [-], 408	89885743	hypothetical protein
11	Rfer_4257	12496..12843 [-], 348	89885744	hypothetical protein
12	Rfer_4258	12974..14875 [-], 1902	89885745	hypothetical protein
13	Rfer_4259	14893..15657 [-], 765	89885746	hypothetical protein	TrbJ
14	Rfer_4260	15694..18189 [-], 2496	89885747	Type IV secretory pathway VirB4 components-like	TrbE
15	Rfer_4261	18183..18488 [-], 306	89885748	hypothetical protein	TrbD
16	Rfer_4262	18499..18867 [-], 369	89885749	conjugal transfer protein TrbC	TrbC
17	Rfer_4263	18868..19863 [-], 996	89885750	type II secretion system protein E	TrbB
18	Rfer_4264	19935..20564 [-], 630	89885751	hypothetical protein
19	Rfer_4265	20573..21202 [-], 630	89885752	hypothetical protein
20	Rfer_4266	21195..23084 [-], 1890	89885753	hypothetical protein	TraG
21	Rfer_4267	23093..25021 [-], 1929	89885754	relaxase
22	Rfer_4268	25127..25696 [-], 570	89885755	hypothetical protein
23	Rfer_4269	25686..25970 [-], 285	89885756	hypothetical protein
24	Rfer_4270	26443..27141 [+], 699	89885757	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_007901