T4SS ID	723
Strain	Achromobacter xylosoxidans A8
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_014640
Location	1163505..1183635
Name	Tfc
Function	conjugation
Classification	Type IVC; Type G
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_014640
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	AXYL_01086 (arsH1)	1160278..1161000 [-], 723	311104292	arsenic resistance protein ArsH
2	AXYL_01087 (arsC1)	1160993..1161415 [-], 423	311104293	arsenate reductase 1
3	AXYL_01088	1161432..1162508 [-], 1077	311104294	sodium bile acid symporter family protein 1
4	AXYL_01089	1162519..1163013 [-], 495	311104295	low molecular weight phosphotyrosine protein phosphatase family protein
5	AXYL_01090	1163016..1163354 [-], 339	311104296	ArsR family transcriptional regulator
6	AXYL_01091 (pilL)	1163505..1164071 [+], 567	311104297	PilL protein	Tfc2
7	AXYL_01092	1164068..1164712 [+], 645	311104298	hypothetical protein
8	AXYL_01093	1164727..1165452 [+], 726	311104299	hypothetical protein	Tfc3
9	AXYL_01094	1165434..1166024 [+], 591	311104300	transglycosylase SLT domain-containing protein 2	Tfc4
10	AXYL_01095	1166021..1166560 [+], 540	311104301	hypothetical protein	Tfc5
11	AXYL_01096	1166565..1168754 [+], 2190	311104302	hypothetical protein	Tfc6
12	AXYL_01097	1168751..1169500 [+], 750	311104303	hypothetical protein	Tfc8
13	AXYL_01098	1169599..1169982 [+], 384	311104304	hypothetical protein	Tfc9
14	AXYL_01099	1169979..1170212 [+], 234	311104305	hypothetical protein
15	AXYL_01100	1170229..1170588 [+], 360	311104306	hypothetical protein
16	AXYL_01101	1170600..1170998 [+], 399	311104307	hypothetical protein	Tfc11
17	AXYL_01102	1170995..1171687 [+], 693	311104308	hypothetical protein	Tfc12
18	AXYL_01103	1171684..1172595 [+], 912	311104309	hypothetical protein	Tfc13
19	AXYL_01104	1172585..1174003 [+], 1419	311104310	hypothetical protein	Tfc14
20	AXYL_01105	1173984..1174433 [+], 450	311104311	signal recognition particle GTPase	Tfc15
21	AXYL_01106	1174433..1177327 [+], 2895	311104312	type IV secretory pathway, VirB4 component	Tfc16
22	AXYL_01107	1177341..1178105 [+], 765	311104313	hypothetical protein
23	AXYL_01108 (radC1)	1178281..1178775 [+], 495	311104314	DNA repair protein RadC 1
24	AXYL_01109	1178993..1179385 [+], 393	311104315	hypothetical protein	Tfc24
25	AXYL_01110	1179382..1180332 [+], 951	311104316	hypothetical protein	Tfc23
26	AXYL_01111	1180342..1181736 [+], 1395	311104317	hypothetical protein	Tfc22
27	AXYL_01112	1181733..1182104 [+], 372	311104318	hypothetical protein
28	AXYL_01113	1182118..1183635 [+], 1518	311104319	TraG-like family protein	Tfc19
29	AXYL_01114	1183651..1184028 [-], 378	311104320	hypothetical protein
30	AXYL_01115	1184055..1184513 [-], 459	311104321	hypothetical protein
31	AXYL_01116	1184513..1184830 [-], 318	311104322	AbrB family transcriptional regulator
32	AXYL_01117	1185130..1187007 [+], 1878	311104323	hypothetical protein
33	AXYL_01118	1187091..1187228 [+], 138	311104324	hypothetical protein
34	AXYL_01119	1187262..1187519 [+], 258	311104325	copper-translocating P-type ATPase 1

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICEAxyA8-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation