ICEberg
I. Information of ICE
ICEberg ID218
Name ICEAxyA8-1 This is a putative ICE identified in this study by Blast
OrganismAchromobacter xylosoxidans A8
Size (bp)83114
GC content [Genome] (%)64.78[65.99]
Insertion sitetRNA-Gly(AXYL_01142)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002287 (complete ICE sequence in this genome)
Replicon[NC_014640]
Genome coordinates1127770..1210913 
Putative oriT region -
Putative relaxase coordinates: 1185130..1187007; Locus tag: AXYL_01117;  Family:  MOBH


II. ICE interaction with IME/CIME/

The interaction information of ICEAxyA8-1 is not available.



The graph information of ICEAxyA8-1 components from CP002287
Complete gene list of ICEAxyA8-1 from CP002287
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1AXYL_010461123874..1126870 [+], 2997outer membrane autotransporter barrel domain protein 2
2AXYL_010471127044..1127658 [-], 615hypothetical protein
3AXYL_010481128618..1129364 [+], 747receptor protein-tyrosine kinase
4AXYL_010491129483..1129695 [+], 213prophage CP4-57 regulatory protein AlpA
5AXYL_010501129738..1130613 [+], 876CobQ/CobB/MinD/ParA nucleotide binding domain protein 1
6AXYL_010511130597..1130857 [+], 261hypothetical protein
7AXYL_010521130850..1132514 [+], 1665hypothetical protein
8AXYL_010531132530..1133090 [+], 561hypothetical protein
9AXYL_010541133094..1134344 [+], 1251hypothetical protein
10AXYL_010551134676..1135464 [+], 789hypothetical protein
11AXYL_010561135461..1135988 [+], 528hypothetical protein
12AXYL_010571136062..1136514 [+], 453single-strand binding family protein
13topB11136791..1138821 [+], 2031DNA topoisomerase III 1
14AXYL_010591139353..1140963 [+], 1611cytosine-specific methyltransferase
15AXYL_010601141006..1141764 [+], 759hypothetical protein
16AXYL_010611142098..1142319 [+], 222hypothetical protein
17AXYL_010621142341..1142733 [+], 393hypothetical protein
18AXYL_010631142916..1143602 [+], 687hypothetical protein
19AXYL_010641143686..1144423 [+], 738hypothetical protein
20AXYL_010651144521..1144799 [+], 279hypothetical protein
21AXYL_010661145088..1145912 [+], 825hypothetical protein
22merR1146174..1146581 [-], 408Hg(II)-responsive transcriptional regulator
23merT1146653..1147003 [+], 351mercuric transport protein
24merP1147016..1147303 [+], 288mercuric transport protein periplasmic component
25merA1147314..1149002 [+], 1689mercuric reductase
26AXYL_010731150088..1150348 [+], 261hypothetical protein
27AXYL_010741150656..1150940 [+], 285hypothetical protein
28AXYL_010751151251..1152156 [+], 906hypothetical protein
29AXYL_010761152302..1153129 [+], 828hypothetical protein
30AXYL_010771153224..1153913 [+], 690hypothetical protein
31AXYL_010781154008..1154349 [+], 342hypothetical protein
32AXYL_010791154454..1154861 [+], 408hypothetical protein
33AXYL_010801154878..1155138 [+], 261hypothetical protein
34AXYL_010811155215..1155862 [+], 648hypothetical protein
35AXYL_010821155927..1157036 [+], 1110O-methyl transferase family protein
36AXYL_010831157087..1157407 [+], 321O-methyl transferase family domain protein
37AXYL_010841157497..1157802 [+], 306hypothetical protein
38AXYL_010851157939..1160218 [+], 2280helicase conserved C-terminal domain protein
39arsH11160278..1161000 [-], 723arsenical resistance protein ArsH 1
40arsC11160993..1161415 [-], 423arsenate reductase (glutaredoxin) 1
41AXYL_010881161432..1162508 [-], 1077sodium bile acid symporter family protein 1
42AXYL_010891162519..1163013 [-], 495low molecular weight phosphotyrosine protein phosphatase family protein
43AXYL_010901163016..1163354 [-], 339bacterial regulatory protein, ArsR family protein 1
44pilL1163505..1164071 [+], 567PilL proteinTfc2, T4SS component 
45AXYL_010921164068..1164712 [+], 645hypothetical proteinTfc2, T4SS component 
46AXYL_010931164727..1165452 [+], 726hypothetical proteinTfc3, T4SS component 
47AXYL_010941165434..1166024 [+], 591transglycosylase SLT domain protein 2Tfc4, T4SS component 
48AXYL_010951166021..1166560 [+], 540hypothetical proteinTfc5, T4SS component 
49AXYL_010961166565..1168754 [+], 2190hypothetical proteinTfc6, T4SS component 
50AXYL_010971168751..1169500 [+], 750putative membrane protein 10Tfc8, T4SS component 
51AXYL_010981169599..1169982 [+], 384hypothetical proteinTfc9, T4SS component 
52AXYL_010991169979..1170212 [+], 234hypothetical protein
53AXYL_011001170229..1170588 [+], 360putative membrane protein 11Tfc10, T4SS component 
54AXYL_011011170600..1170998 [+], 399hypothetical proteinTfc11, T4SS component 
55AXYL_011021170995..1171687 [+], 693hypothetical proteinTfc12, T4SS component 
56AXYL_011031171684..1172595 [+], 912hypothetical proteinTfc13, T4SS component 
57AXYL_011041172585..1174003 [+], 1419hypothetical proteinTfc14, T4SS component 
58AXYL_011051173984..1174433 [+], 450signal recognition particle GTPaseTfc15, T4SS component 
59AXYL_011061174433..1177327 [+], 2895type IV secretory pathway, VirB4 componentTfc16, T4SS component 
60AXYL_011071177341..1178105 [+], 765hypothetical protein
61radC11178281..1178775 [+], 495DNA repair protein RadC 1
62AXYL_011091178993..1179385 [+], 393hypothetical proteinTfc24, T4SS component 
63AXYL_011101179382..1180332 [+], 951hypothetical proteinTfc23, T4SS component 
64AXYL_011111180342..1181736 [+], 1395hypothetical proteinTfc22, T4SS component 
65AXYL_011121181733..1182104 [+], 372putative membrane protein 12
66AXYL_011131182118..1183635 [+], 1518TraG-like family proteinTfc19, T4SS component 
67AXYL_011141183651..1184028 [-], 378hypothetical protein
68AXYL_011151184055..1184513 [-], 459hypothetical protein
69AXYL_011161184513..1184830 [-], 318transcriptional regulator, AbrB family domain protein
70AXYL_011171185130..1187007 [+], 1878hypothetical proteinRelaxase, MOBH Family
71AXYL_011181187091..1187228 [+], 138hypothetical protein
72AXYL_011191187262..1187519 [+], 258copper-translocating P-type ATPase 1
73AXYL_011201187479..1188915 [-], 1437sensor kinase CusS
74irlR21188887..1189579 [-], 693transcriptional activator protein IrlR 2
75AXYL_011221189576..1189695 [-], 120hypothetical protein
76AXYL_011231189833..1191737 [+], 1905copper resistance protein A 1
77AXYL_011241191763..1192743 [+], 981copper resistance protein B domain protein
78AXYL_011251192781..1193266 [+], 486hypothetical protein
79AXYL_011261193300..1193572 [+], 273hypothetical protein
80AXYL_011271193860..1196166 [+], 2307copper-translocating P-type ATPase 2
81copC1196308..1196694 [+], 387copper resistance protein C
82AXYL_011291196699..1197625 [+], 927copper resistance protein D
83AXYL_011301197754..1198038 [+], 285hypothetical protein
84AXYL_011311198270..1199160 [+], 891transcriptional regulator 2
85AXYL_011321199165..1199470 [-], 306helix-turn-helix family protein 2
86AXYL_011331199578..1200219 [+], 642bacterial regulatory helix-turn-helix protein, LysR family protein 34
87AXYL_011341200055..1200297 [-], 243hypothetical protein
88AXYL_011351200506..1200817 [+], 312hypothetical protein
89AXYL_011361200970..1201947 [+], 978transposase, IS4 family protein 1
90AXYL_011371202120..1203355 [+], 1236heavy metal RND efflux outer membrane protein, CzcC family
91AXYL_011381203371..1204882 [+], 1512efflux transporter, RND family, MFP subunit 3
92cusA1204879..1207995 [+], 3117cation efflux system protein CusA
93AXYL_011401208156..1208386 [-], 231transcriptional regulator, LysR family domain protein 1
94AXYL_011411208744..1210687 [-], 1944phage integrase family protein 1Integrase 
95AXYL_011431211319..1212053 [+], 735succinate dehydrogenase and fumarate reductase iron-sulfur family protein
96AXYL_011441212055..1212390 [+], 336putative membrane protein 13
97AXYL_011451212387..1212731 [+], 345succinate dehydrogenase, cytochrome b subunit
98AXYL_011461212733..1214472 [+], 1740fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain protein
99AXYL_011471214486..1215421 [+], 936hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region domain protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins92Fasta
Identified as part of this study from CP002287

Genomics & Bioinformatics Group in MML, SJTU