SecReT4

T4SS
References

T4SS ID	674
Strain	Clostridium difficile CD196
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_013315
Location	4024620..4037007
Name	Tra_Tn
Function	NA
Classification	Type IVD; Type GP
This T4SS is identified in this study.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	1	1	0	1	1

The information of T4SS components from NC_013315

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	CD196_3408	4021585..4021908 [+], 324	260685137	conjugative transposon protein
2	CD196_3409	4022922..4023380 [+], 459	260685138	hypothetical protein
3	CD196_3410	4023405..4023947 [+], 543	260685139	hypothetical protein
4	CD196_3411	4023983..4024510 [+], 528	260685140	hypothetical protein
5	CD196_3412	4024620..4026014 [+], 1395	260685141	conjugative transposon FtsK/SpoIIIE-like protein	Orf21_Tn
6	CD196_3413	4026294..4027415 [+], 1122	260685142	conjugative transposon replication initiation factor
7	CD196_3414	4027557..4027778 [+], 222	260685143	conjugative transposon protein	Orf19_Tn
8	CD196_3415	4028092..4028736 [+], 645	260685144	chloramphenicol o-acetyltransferase
9	CD196_3416	4029022..4029519 [+], 498	260685145	conjugative transposon protein
10	CD196_3417	4029535..4030038 [+], 504	260685146	conjugative transposon protein
11	CD196_3418	4030527..4032959 [+], 2433	260685147	conjugative transposon protein	Orf16_Tn
12	CD196_3419	4032959..4035094 [+], 2136	260685148	conjugative transposon protein	Orf15_Tn
13	CD196_3420	4035091..4036098 [+], 1008	260685149	cell wall hydrolase	Orf14_Tn
14	CD196_3421	4036114..4037007 [+], 894	260685150	conjugative transposon protein	Orf13_Tn
15	CD196_3422	4037220..4038077 [+], 858	260685151	hypothetical protein
16	CD196_3423	4038149..4038736 [+], 588	260685152	transcriptional regulator
17	CD196_3424	4038765..4039685 [+], 921	260685153	ABC transporter ATP-binding protein
18	CD196_3425	4039682..4040365 [+], 684	260685154	ABC transporter permease
19	CD196_3426	4040362..4041060 [+], 699	260685155	ABC transporter permease
20	CD196_3427	4041072..4041983 [+], 912	260685156	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_013315