| Protein ID: 260685149 |
 T4SS name [ID] | Tra_Tn [674] |
| Gene symbol | - |
| Locus tag | CD196_3420 |
| Strain | Clostridium difficile CD196 |
| Replicon | chromosome [GenBank: NC_013315] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 4035091..4036098 [+] |
| Product | cell wall hydrolase |
| Component type | Orf14_Tn |
| UniProt ID | C9XSN3 |
| KEGG ID | cdc:CD196_3420 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Lysozyme_like [PF13702], Evalue: 1.4e-58, Aligned region: 47..204 NLPC_P60 [PF00877], Evalue: 9.7e-31, Aligned region: 226..331 DUF1175 [PF06672], Evalue: 1.9e-05, Aligned region: 273..311 |
| Protein Sequence: 335 a.a. [Download] |
| >gi|260685149|ref|YP_003216434.1| cell wall hydrolase [Clostridium difficile CD196] MKLRHIAIVGSLFSILFSLVLFFGVLISAEDDDGGNGYSSNYVGMNLSAEVLKHQPMVEKYAKENGISEY VNVLLVIIQVESGGTAEDVMQSSESLGLPPNSLDTESSIKQGCKYFASLLSSCKNQGISDINVVIQSYNY GGGYVGYVAGNGKKHMFNLAENFARDKSGGQKVTYTNPIAVAKNGGWRYGYGNMFYVELVNQYLVVNQVS GELAQKVMNEALKYQGWKYVYGGSNPNTSFDCSGLVQWCYNKAGVSLPRTAQNQYDATQHIPLSQAKAGD LVFFHSTYNAGSYVTHVGIYVGNTQMYHAGDPIGYADLNNAYWQQYLICAGRIKQ |
| Nucleotide Sequence: 1008 bp [Download] |
| >gi|260681769|ref|NC_013315.1|:4035091-4036098 Clostridium difficile CD196 chromosome, complete genome ATGAAACTAAGACATATCGCTATTGTTGGCAGTCTGTTTTCTATCCTCTTTTCTCTCGTATTATTCTTTG GGGTTCTGATTAGTGCCGAGGACGACGACGGGGGCAATGGTTATTCCTCTAATTATGTAGGTATGAACCT ATCTGCCGAAGTCTTGAAACATCAGCCTATGGTAGAAAAGTATGCCAAAGAAAACGGTATTTCCGAGTAT GTCAATGTGTTGCTGGTAATCATACAAGTGGAAAGTGGCGGTACAGCCGAGGACGTTATGCAAAGCTCTG AAAGTCTGGGACTACCACCCAACTCACTAGATACGGAAAGCTCAATCAAGCAGGGGTGTAAATATTTTGC GTCCCTGCTTTCTTCCTGCAAAAATCAAGGTATCAGTGATATAAATGTTGTGATACAGTCCTATAACTAT GGCGGTGGCTATGTTGGCTATGTGGCAGGAAACGGAAAAAAGCATATGTTCAACCTTGCGGAAAACTTCG CAAGGGATAAGTCGGGCGGTCAAAAAGTAACCTATACGAACCCTATCGCCGTGGCAAAAAATGGTGGCTG GCGTTATGGCTATGGAAATATGTTCTATGTGGAGCTTGTGAACCAGTACCTTGTTGTCAATCAAGTATCG GGCGAGCTGGCACAAAAGGTTATGAATGAAGCCTTAAAATATCAAGGTTGGAAGTATGTATATGGTGGCA GTAACCCGAACACTTCTTTTGATTGTTCGGGACTGGTACAGTGGTGCTACAACAAAGCTGGCGTATCTTT ACCGAGAACCGCACAAAATCAGTATGACGCAACCCAGCATATCCCACTATCGCAGGCAAAGGCAGGCGAT TTGGTCTTTTTCCACAGTACCTACAATGCAGGAAGCTATGTAACCCACGTCGGTATCTATGTAGGAAACA CTCAGATGTATCATGCAGGCGACCCTATCGGATATGCCGATTTAAACAATGCTTATTGGCAACAGTACTT GATTTGTGCTGGAAGAATAAAACAGTAG |