T4SS ID	670
Strain	Clostridium difficile 630
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009089
Location	3950845..3963219
Name	Tra_Tn
Function	conjugation
Classification	Type IVD; Type GP
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	Orf13_Tn	Orf14_Tn	Orf15_Tn	Orf16_Tn	Orf17_Tn	Orf19_Tn	Orf21_Tn
Number	1	1	0	1	1	1	1

The information of T4SS components from NC_009089
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	CD630_33750 (mgtC)	3946063..3946740 [-], 678	400927537	magnesium-transporting ATPase protein C; 0
2	CD630_33760	3946878..3947381 [-], 504	400927538	transcriptional regulator
3	CD630_33770 (mgtA)	3947397..3950060 [-], 2664	126701000	magnesium-transporting ATPase, P-type 1; 2
4	CD630_33780	3950153..3950362 [-], 210	126701001	conjugative transposon protein
5	CD630_33790	3950845..3951747 [-], 903	400927539	conjugative transposon protein
6	CD630_33800	3951764..3952771 [-], 1008	126701003	cell wall hydrolase	Orf14_Tn
7	CD630_33830	3954969..3957419 [-], 2451	126701004	ATPase	Orf16_Tn
8	CD630_33840	3957397..3957795 [-], 399	126701005	conjugative transposon protein	Orf17_Tn
9	CD630_33850	3957913..3958416 [-], 504	126701006	antirestriction protein
10	CD630_33860	3958434..3958937 [-], 504	126701007	antirestriction protein
11	CD630_33861	3958856..3959152 [-], 297	400927540	conjugative transposon protein
12	CD630_33870	3959235..3960044 [-], 810	126701008	conjugative transposon protein
13	CD630_33871	3960083..3960304 [-], 222	126701009	conjugative transposon protein	Orf19_Tn
14	CD630_33880	3960451..3961641 [-], 1191	126701010	replication initiation factor
15	CD630_33890	3961825..3963219 [-], 1395	126701011	cell-division FtsK/SpoIIIE-family protein Tn916-like, CTn7-Orf28	Orf21_Tn
16	CD630_33900	3963236..3963619 [-], 384	126701012	conjugative transposon protein
17	CD630_33910	3963635..3963961 [-], 327	126701013	conjugative transposon protein
18	CD630_33911	3963993..3964187 [-], 195	126701014	hypothetical protein
19	CD630_33920	3964200..3967244 [-], 3045	126701015	cell surface protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) CTn7 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Sebaihia M; Wren BW; Mullany P; Fairweather NF; Minton N; Stabler R; Thomson NR; Roberts AP; Cerdeno-Tarraga AM; Wang H; Holden MT; Wright A; Churcher C; Quail MA; Baker S; Bason N; Brooks K; Chillingworth T; Cronin A; Davis P; Dowd L; Fraser A; Feltwell T; Hance Z; Holroyd S; Jagels K; Moule S; Mungall K; Price C; Rabbinowitsch E; Sharp S; Simmonds M; Stevens K; Unwin L; Whithead S; Dupuy B; Dougan G; Barrell B; Parkhill J (2006). The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet. 38(7):779-86. [PudMed:16804543]