T4SS ID627
StrainStaphylococcus aureus subsp. aureus ED98
Repliconchromosome [Browse all T4SS(s) in this replicon]
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components

The information of T4SS components from NC_013450
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SAAV_19251962412..1962927 [-], 516269203512ThiJ/PfpI family protein 
2SAAV_19261963058..1963219 [-], 162269203513hypothetical protein 
3SAAV_19271963443..1964594 [+], 1152269203514hypothetical protein 
4SAAV_19281964717..1965001 [+], 285269203515transposon-related protein 
5SAAV_19291965152..1965472 [+], 321269203516transposon-related protein 
6SAAV_19301965486..1965788 [+], 303269203517transposon-related protein 
7SAAV_19311965963..1967054 [+], 1092269203518replication initiation factor family protein 
8SAAV_19321967115..1968170 [+], 1056269203519transposon-related protein  YddB
9SAAV_19331968175..1968435 [+], 261269203520transposon-related protein  YddC
10SAAV_19341968447..1968830 [+], 384269203521transposon-related protein  YddD
11SAAV_19351968865..1971360 [+], 2496269203522transposon-related protein  YddE
12SAAV_19361971414..1972772 [+], 1359269203523ftsk/spoiiie family protein  YdcQ
13SAAV_19371972777..1974624 [+], 1848269203524transposon-related protein  YddG
14SAAV_19381974614..1975660 [+], 1047269203525Putative TraG protein 
15SAAV_19391975667..1976257 [+], 591269203526transposon-related protein 
16SAAV_19401976313..1976669 [+], 357269203527lipoprotein, putative 
17SAAV_19411976778..1977281 [+], 504269203528transposase 
18SAAV_19421977349..1977798 [+], 450269203529transposase 
19SAAV_19431978211..1978741 [-], 531269203530hypothetical protein 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESauED98-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
in_silico This literature contains bioinformatics investigation