 T4SS ID | 624 |
| Strain | Staphylococcus aureus subsp. aureus USA300_TCH1516 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_010079 |
| Location | 684312..691821 |
| Name | Ydd |
| Function | conjugation |
| Classification | Type IVD; Type GP |
 Bioinformatics investigation has been performed on this T4SS. | |
T4SS components |
| Component | YdcQ | YddB | YddC | YddD | YddE | YddG | YddH |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
The information of T4SS components from NC_010079 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | USA300HOU_0623 | 680132..680281 [-], 150 | 161508868 | hypothetical protein | ||
| 2 | USA300HOU_0626 | 682267..682623 [-], 357 | 161508869 | hypothetical protein | ||
| 3 | USA300HOU_0627 | 682679..683269 [-], 591 | 161508870 | hypothetical protein | ||
| 4 | USA300HOU_0628 | 683276..684322 [-], 1047 | 161508871 | hypothetical protein | ||
| 5 | USA300HOU_0629 | 684312..686159 [-], 1848 | 161508872 | hypothetical protein | YddG | |
| 6 | USA300HOU_0630 | 686164..687522 [-], 1359 | 161508873 | FtsK/SpoIIIE family cell division protein | YdcQ | |
| 7 | USA300HOU_0631 | 687576..690071 [-], 2496 | 161508874 | hypothetical protein | YddE | |
| 8 | USA300HOU_0632 | 690106..690489 [-], 384 | 161508875 | hypothetical protein | YddD | |
| 9 | USA300HOU_0633 | 690501..690761 [-], 261 | 161508876 | hypothetical protein | YddC | |
| 10 | USA300HOU_0634 | 690766..691821 [-], 1056 | 161508877 | hypothetical protein | YddB | |
| 11 | USA300HOU_0635 | 691882..692973 [-], 1092 | 161508878 | replication initiation protein | ||
| 12 | USA300HOU_0636 | 693148..693450 [-], 303 | 161508879 | hypothetical protein | ||
| 13 | USA300HOU_0637 | 693464..693784 [-], 321 | 161508880 | hypothetical protein | ||
| 14 | USA300HOU_0638 | 693935..694219 [-], 285 | 161508881 | hypothetical protein | ||
| 15 | USA300HOU_0640 | 694851..695075 [-], 225 | 161508882 | hypothetical protein | ||
| 16 | USA300HOU_0641 | 695092..695295 [-], 204 | 161508883 | hypothetical protein | ||
| 17 | USA300HOU_0642 | 695454..696014 [+], 561 | 161508884 | bacteriophage integrase | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
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(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]
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| This literature contains bioinformatics investigation |