T4SS ID	620
Strain	Staphylococcus aureus subsp. aureus COL
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_002951
Location	1611280..1618789
Name	Ydd
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	YdcQ	YddB	YddC	YddD	YddE	YddG	YddH
Number	1	1	1	1	1	1	0

The information of T4SS components from NC_002951
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SACOL1572 (accB)	1607302..1607766 [-], 465	57650484	acetyl-CoA carboxylase, biotin carboxyl carrier protein
2	SACOL1574	1609250..1609591 [-], 342	57650485	hypothetical protein
3	SACOL1575	1609647..1610237 [-], 591	57650486	hypothetical protein
4	SACOL1576	1610244..1611290 [-], 1047	57650487	traG protein
5	SACOL1577	1611280..1613127 [-], 1848	57650488	hypothetical protein	YddG
6	SACOL1578	1613132..1614490 [-], 1359	57650489	FtsK/SpoIIIE family protein	YdcQ
7	SACOL1579	1614544..1617039 [-], 2496	57650490	hypothetical protein	YddE
8	SACOL1580	1617074..1617457 [-], 384	57650491	hypothetical protein	YddD
9	SACOL1581	1617469..1617729 [-], 261	57650492	hypothetical protein	YddC
10	SACOL1582	1617734..1618789 [-], 1056	57650493	hypothetical protein	YddB
11	SACOL1583	1618850..1619941 [-], 1092	57651919	replication initiation factor family protein
12	SACOL1584	1620116..1620418 [-], 303	57651920	hypothetical protein
13	SACOL1585	1620432..1620752 [-], 321	57651921	hypothetical protein
14	SACOL1586	1620903..1621187 [-], 285	57651922	hypothetical protein
15	SACOL1587 (efp)	1621582..1622139 [-], 558	57651923	elongation factor P
16	SACOL1588	1622165..1623226 [-], 1062	57651924	proline dipeptidase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESauCOL-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation