The information of T4SS components from NC_015722 |
| Region 1: 268366..270612 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00293 | 265035..265292 [+], 258 | 339319596 | hypothetical protein | | |
| 2 | midi_00294 | 265754..268366 [-], 2613 | 339319597 | hypothetical protein | | |
| 3 | midi_00295 (virB4) | 268366..270612 [-], 2247 | 339319598 | type IV secretion system protein VirB4 | VirB4 | |
| 4 | midi_00296 | 271043..271312 [+], 270 | 339319599 | hypothetical protein | | |
| 5 | midi_00297 (dapD) | 271784..272515 [-], 732 | 339319600 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase | | |
| 6 | midi_00300 (dapA) | 272505..273389 [-], 885 | 339319601 | dihydrodipicolinate synthase | | |
| 7 | midi_00301 (dapB) | 273379..274143 [-], 765 | 339319602 | dihydrodipicolinate reductase | | |
| 8 | midi_00302 | 274472..275203 [-], 732 | 339319603 | hypothetical protein | | |
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| Region 2: 413626..419348 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00439 | 410896..411222 [+], 327 | 339319737 | hypothetical protein | | |
| 2 | midi_00440 | 411522..411761 [+], 240 | 339319738 | hypothetical protein | | |
| 3 | midi_00441 (fliP) | 412519..412959 [-], 441 | 339319739 | flagellar biosynthesis protein FliP | | |
| 4 | midi_00442 | 413252..413404 [-], 153 | 339319740 | hypothetical protein | | |
| 5 | midi_00443 (virD4) | 413626..415011 [-], 1386 | 339319741 | type IV secretion system protein VirD4 | VirD4 | |
| 6 | midi_00444 (virB11) | 415440..416423 [-], 984 | 339319742 | type IV secretion system protein VirB11 | VirB11 | |
| 7 | midi_00445 (virB10) | 416420..417898 [-], 1479 | 339319743 | type IV secretion system protein VirB10 | VirB10 | |
| 8 | midi_00446 (virB9) | 417944..418657 [-], 714 | 339319744 | type IV secretion system protein VirB9 | VirB9 | |
| 9 | midi_00447 (virB8) | 418641..419348 [-], 708 | 339319745 | type IV secretion system protein VirB8 | VirB8 | |
| 10 | midi_00448 (sodA) | 419392..420015 [-], 624 | 339319746 | superoxide dismutase | | |
| 11 | midi_00449 | 420169..421086 [+], 918 | 339319747 | NADH dehydrogenase subunit I | | |
| 12 | midi_00450 | 421090..421446 [+], 357 | 339319748 | NADH dehydrogenase subunit II | | |
| 13 | midi_00451 | 421685..421999 [+], 315 | 339319749 | hypothetical protein | | |
| 14 | midi_00452 | 422003..422512 [+], 510 | 339319750 | hypothetical protein | | |
| 15 | midi_00453 (truB) | 422545..423426 [+], 882 | 339319751 | tRNA pseudouridine synthase B | | |
| 16 | midi_00454 (rpsO) | 423436..423705 [+], 270 | 339319752 | 30S ribosomal protein S15 | | |
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| Region 3: 663237..665336 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00697 | 660660..661250 [+], 591 | 339319984 | putative yrdC domain-containing protein | | |
| 2 | midi_00698 | 661430..661609 [+], 180 | 339319985 | hypothetical protein | | |
| 3 | midi_00699 | 661760..661969 [+], 210 | 339319986 | glycosyl transferase, group 1 | | |
| 4 | midi_00700 | 663237..665336 [-], 2100 | 339319987 | putative type IV secretion system protein | VirB6 | |
| 5 | midi_00701 | 665354..666763 [-], 1410 | 339319988 | type IV secretion system protein | | |
| 6 | midi_00702 | 666827..668293 [-], 1467 | 339319989 | hypothetical protein | | |
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| Region 4: 680352..680642 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00707 | 676033..676215 [-], 183 | 339319992 | hypothetical protein | | |
| 2 | midi_00708 (pyrG) | 677764..679413 [-], 1650 | 339319993 | CTP synthase | | |
| 3 | midi_00709 (secG) | 679419..679721 [-], 303 | 339319994 | preprotein translocase subunit SecG | | |
| 4 | midi_00710 | 679834..680130 [+], 297 | 339319995 | hypothetical protein | | |
| 5 | midi_00711 (virB2) | 680352..680642 [+], 291 | 339319996 | type IV secretion system protein VirB2 | VirB2 | |
| 6 | midi_00712 | 680856..681824 [+], 969 | 339319997 | octaprenyl-diphosphate synthase | | |
| 7 | midi_00713 | 682242..682406 [+], 165 | 339319998 | hypothetical protein | | |
| 8 | midi_00714 | 682453..682605 [+], 153 | 339319999 | hypothetical protein | | |
| 9 | midi_00715 | 683276..683461 [+], 186 | 339320000 | putative transposase | | |
| 10 | midi_00716 | 683475..683606 [+], 132 | 339320001 | putative transposase | | |
| 11 | midi_00717 | 683625..683858 [+], 234 | 339320002 | putative transposase | | |
| 12 | midi_00718 (gltX) | 683983..685338 [-], 1356 | 339320003 | glutamyl-tRNA synthetase | | |
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| Region 5: 751689..754247 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00785 (lepA) | 747894..749567 [+], 1674 | 339320066 | GTP-binding protein LepA | | |
| 2 | midi_00786 | 749774..750430 [-], 657 | 339320067 | hypothetical protein | | |
| 3 | midi_00787 | 750882..751070 [+], 189 | 339320068 | putative transposase | | |
| 4 | midi_00788 | 751689..754247 [-], 2559 | 339320069 | putative type IV secretion system protein | VirB6 | |
| 5 | midi_00789 | 754252..754782 [-], 531 | 339320070 | hypothetical protein | | |
| 6 | midi_00790 | 755632..755886 [+], 255 | 339320071 | hypothetical protein | | |
| 7 | midi_00791 | 756260..756385 [+], 126 | 339320072 | hypothetical protein | | |
| 8 | midi_00792 | 756455..756568 [+], 114 | 339320073 | hypothetical protein | | |
| 9 | midi_00793 | 757233..757364 [+], 132 | 339320074 | putative transposase | | |
| 10 | midi_00794 | 757558..757671 [+], 114 | 339320075 | hypothetical protein | | |
| 11 | midi_00795 (plsC) | 757743..758444 [-], 702 | 339320076 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | | |
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| Region 6: 842292..843785 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | midi_00891 (cYT1) | 837614..838378 [+], 765 | 339320166 | cytochrome c1 heme protein | | |
| 2 | midi_00892 | 838383..839684 [+], 1302 | 339320167 | ubiquinone biosynthesis protein | | |
| 3 | midi_00893 (gltA) | 839914..841230 [+], 1317 | 339320168 | citrate synthase I | | |
| 4 | midi_00894 | 841709..841822 [-], 114 | 339320169 | putative transposase | | |
| 5 | midi_00895 | 842292..843071 [-], 780 | 339320170 | putative type IV secretion system protein | VirB9 | |
| 6 | midi_00896 | 843075..843785 [-], 711 | 339320171 | putative type IV secretion system protein | VirB8 | |
| 7 | midi_00897 | 843894..844958 [-], 1065 | 339320172 | hypothetical protein | | |
| 8 | midi_00898 | 844951..845613 [-], 663 | 339320173 | chromosomal replication initiator proteinDnaA like protein | | |
| 9 | midi_00899 | 845718..846560 [-], 843 | 339320174 | putative permease | | |
| 10 | midi_00900 | 846575..846973 [-], 399 | 339320175 | hypothetical protein | | |
| 11 | midi_00901 (pcnB) | 847021..848223 [-], 1203 | 339320176 | polyApolymerase family protein | | |
| 12 | midi_00902 | 848484..848762 [+], 279 | 339320177 | membrane protein implicated in regulation of membrane protease activity | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.